Gene YPK_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1080 
SymbolrnhB 
ID6087389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp1218876 
End bp1219472 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content51% 
IMG OID641596146 
Productribonuclease HII 
Protein accessionYP_001719834 
Protein GI170023329 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA CTTTTATTTA CCCACAGGCT AATTTAATCG CAGGCGTGGA TGAAGTGGGT 
CGTGGCCCTT TGGTGGGTGC CGTAGTCACT GCAGCGGTGA TCCTTGATCC TAACCGGCCA 
ATAGTTGGCT TGGCAGATTC AAAAAAACTC AGCGAGAAGC GCCGCCTGTC ACTGTATGAC 
GAAATCACTG AAAAGGCACT ATCATGGAGT CTTGGTCGTG CTGAACCGGA AGAAATTGAT 
CAGCTTAATA TTTTGCACGC AGCCATGCTG GCGATGCAAA GGGCTGTATC GGGGCTGCAT 
ATTGTACCCG ATTATGTATT GATAGATGGT AACCGTTGCC CGAAATTACA GATGCCGTCA 
CTGGCCGTTG TCAAAGGAGA TAGCCGGGTG GCGGAGATCA GCGCGGCTTC TATTTTAGCC 
AAAGTGACGC GTGATCGTGA AATGACCGAG TTGGACCTCC TCTTCCCTGA ATATGGTTTC 
GCACAACATA AAGGCTACCC AACGGCTTTT CATTTGGAAA AGTTAGCCGC GCTTGGTGCC 
ACGGTACATC ATCGGCGCAG TTTTGGCCCG GTGAAACGGG TGCTGGGTTT GGTGTAA
 
Protein sequence
MSETFIYPQA NLIAGVDEVG RGPLVGAVVT AAVILDPNRP IVGLADSKKL SEKRRLSLYD 
EITEKALSWS LGRAEPEEID QLNILHAAML AMQRAVSGLH IVPDYVLIDG NRCPKLQMPS 
LAVVKGDSRV AEISAASILA KVTRDREMTE LDLLFPEYGF AQHKGYPTAF HLEKLAALGA 
TVHHRRSFGP VKRVLGLV