| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1079 |
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| Symbol | lpxB |
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| ID | 6091301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1217695 |
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| End bp | 1218879 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641596145 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001719833 |
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| Protein GI | 170023328 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.848234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATA GCCCATTGAC TGCTGATTGT TCATTAAACG CTGGACGTCC CCTAACGATT
GGTTTAGTTG CCGGAGAAAC TTCCGGCGAT ATCTTAGGCG CTGGATTAAT TCTGGCGCTG
AAAGTTCAGG TACCCAATGC CCGATTTGTC GGTGTCGCTG GGCCTCTGAT GCAAGCCGAA
GGGTGTGAAG CCTGGTATGA GATGGAAGAG TTAGCCGTCA TGGGCGTTGT TGAAGTATTA
GAGCGCCTGC CACGGTTATT GAAAATCAGG AAGGATCTGA CTCAGCGTTT TAGTGAGCTT
TCTCCCGATG TCTTTGTTGG CATTGACGCC CCCGATTTCA ACATCACCCT TGAAGGGCGC
TTAAAACAAC GGGGTATTCG GACTATTCAT TATGTCAGCC CATCAGTCTG GGCCTGGCGA
CAAAAACGTG TTTTCAAAAT TGGAAAAGCG ACCGACATGG TGTTGGCTTT TCTCCCTTTT
GAAAAAGCGT TTTATGATCG TTTCAATGTC CCTTGCCGTT TTATAGGCCA TACCATGGCC
GATGCCATGC CACTAGTACC CGATCAGCAG GCAGCGAGAG CAGAGCTTGG CATTGCGCCT
AATGCCACTT GTCTGGCGCT GTTACCGGGT AGCCGCCACT CTGAAGTTGA AATGCTCAGC
GCTGATTTTT TACGTACAGC GGTAATTCTG CGTGATAAAT TGCCCAATTT GGAAGTAGTG
GTTCCCTTGG TCAACAGCAA GCGACGTGAA CAATTCGAGC GAATTAAAGC GGAAATTGCG
CCTGATTTAT CCGTACATTT ACTGGATGGT AAAGCGCGTG TCGCGATGAT CGCCAGTGAT
GCAGCATTGT TAGCCTCAGG CACGGCTGCA CTCGAATGTA TGCTGGCCAA ATGCCCGATG
GTTGTGGGGT ATCGTATGAA GCCATTTACT TTCTGGTTGG CAGAGCGATT AGTCAAAACA
CCTTATGTTT CATTACCGAA TCTGTTAGCA GGGGAAGAGT TGGTGACAGA ATTGTTGCAA
CAAGAGTGCC AGCCGCAAAA ACTCGCTGGT GCACTTTTGC CGTTGCTACA AGGTGGTAGC
GAAATAGCAG CCTTAAAAGA ACGTTTTTTG GTTCTGCATC AGAGCATCCG CTGTGGTGCG
GATGAACAGG CAGCACAAGC TGTATTGGAG CTGGCAGATC GATGA
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| Protein sequence | MQNSPLTADC SLNAGRPLTI GLVAGETSGD ILGAGLILAL KVQVPNARFV GVAGPLMQAE
GCEAWYEMEE LAVMGVVEVL ERLPRLLKIR KDLTQRFSEL SPDVFVGIDA PDFNITLEGR
LKQRGIRTIH YVSPSVWAWR QKRVFKIGKA TDMVLAFLPF EKAFYDRFNV PCRFIGHTMA
DAMPLVPDQQ AARAELGIAP NATCLALLPG SRHSEVEMLS ADFLRTAVIL RDKLPNLEVV
VPLVNSKRRE QFERIKAEIA PDLSVHLLDG KARVAMIASD AALLASGTAA LECMLAKCPM
VVGYRMKPFT FWLAERLVKT PYVSLPNLLA GEELVTELLQ QECQPQKLAG ALLPLLQGGS
EIAALKERFL VLHQSIRCGA DEQAAQAVLE LADR
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