| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1076 |
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| Symbol | lpxD |
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| ID | 6087596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1215189 |
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| End bp | 1216211 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641596142 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001719830 |
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| Protein GI | 170023325 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000102577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTTCAA TTCGACTGGC TGATTTAGCC CAGCAGTTGG ATGCACAGGT GCACGGTGAT
GGCGATCTTG TCATCACCGG CATCGCTTCT ATGCATTCTG CCCAACCTGA GCAAATCACG
TTTTTGTCAA ACAGCCGCTA TCGGGAACAA CTTGCATCTT GCAATGCAGG TGCTGTGGTA
TTGACTGAGG CTGATTTACC TTTTTGTAAA GTTGCTGCTT TAGTTGTTGA AAATCCTTAT
TTCACCTATG CGCGCATGGC TCAAATAATG GATACCACCC CTCAACCTGC TCAGGATATC
GCACCGAGTG CCGTGATTTC TCCGCAGGCA ACGTTGGGCG AGGGGGTTTC TGTTGGTGCG
AATGCAGTCA TAGAGTCGGG TGTTGTACTC GGCGATAATG TTGTCATCGG TGCGGGTTGC
TTCATTGGTA AGAACACCCA TATTGGTGCG GGTAGCCGTT TGTGGGCTAA TGTTTCTATC
TATCATGAAG TTGTTATTGG GCAGAATTGC CTGATCCAAT CTGGTACTGT CATTGGTGCC
GATGGCTTTG GTTATGCAAA TGATCGTGGT AACTGGGTAA AAATACCGCA GCTTGGTTCT
GTACATATTG GCGACCGTGT TGAGATTGGT GCCTGTACAA CGATTGACCG TGGTGCGCTG
GATAACACGA TTATTGGTAA CGGTGTCATC ATTGATAACC AATGTCAGAT TGCACATAAC
GTTGTGATTG GCGACAATAC GGCAGTTGCC GGTGGTGTTA TCATGGCTGG CAGTTTGAAA
GTGGGCCGCT ATTGTATGAT TGGCGGTGCC AGTGTGATTA ATGGCCATAT GGAAATTTGT
GACAAAGTAA CAATTACCGG GATGGGAATG GTGATGAGAC CAATCACTGA ACCTGGGTTA
TACTCCTCCG GTATTCCGTT ACAACCAAAT AAAATGTGGC GCAAAACTGC CGCTCTAGTG
ATGAATATTG ATGGTATTAA TAAACGCTTA AAAGCTGTTG AGCGTAAAAT CGATAAAGAA
TAA
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| Protein sequence | MPSIRLADLA QQLDAQVHGD GDLVITGIAS MHSAQPEQIT FLSNSRYREQ LASCNAGAVV
LTEADLPFCK VAALVVENPY FTYARMAQIM DTTPQPAQDI APSAVISPQA TLGEGVSVGA
NAVIESGVVL GDNVVIGAGC FIGKNTHIGA GSRLWANVSI YHEVVIGQNC LIQSGTVIGA
DGFGYANDRG NWVKIPQLGS VHIGDRVEIG ACTTIDRGAL DNTIIGNGVI IDNQCQIAHN
VVIGDNTAVA GGVIMAGSLK VGRYCMIGGA SVINGHMEIC DKVTITGMGM VMRPITEPGL
YSSGIPLQPN KMWRKTAALV MNIDGINKRL KAVERKIDKE
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