Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1066 |
Symbol | rpsB |
ID | 6090548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1204135 |
End bp | 1204860 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641596132 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001719820 |
Protein GI | 170023315 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00351639 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTG TTTCCATGCG CGACATGCTC CAGGCTGGTG TTCACTTTGG TCACCAAACC CGTTACTGGA ACCCGAAAAT GAAGCCTTTC ATCTTCGGCG CACGTAACAA AGTTCACATC ATCAACCTGG AAAAAACTGT ACCAATGTTC AACGAAGCTC TGGCTGAGTT GACTAAAATT TCTTCCCGTA AAGGTAAGAT CCTGTTTGTT GGTACTAAAC GCGCAGCAAG CGAAGCGGTA AAAGAAGCTG CTAACAACTG CGACCAGTTC TTCGTGAACC ATCGCTGGTT GGGCGGGATG CTGACTAACT GGAAAACTGT TCGTCAGTCC ATCAAACGTT TGAAAGATTT GGAAATCCAG TCTCAAGACG GCACCTTTGA TAAGCTGACC AAAAAAGAAG CGCTGATGCG TACCCGTGAA CTGAACAAGC TGGAAAACAG CCTGGGTGGT ATCAAAGACA TGGGCGGCTT ACCAGACGCA CTGTTTGTTG TTGATGCTGA TCACGAACAC ATCGCTATCA AAGAAGCTAA TAACCTGGGT ATCCCGGTAT TCTCTATCGT TGATACTAAC TCCGATCCAG ATGGCGTTGA CTTCATCATC CCTGGTAACG ATGACGCAAT CCGTGCAGTT AAACTGTACC TAGGCGCTGT TGCTACCGCC GTCCGTGAAG GTCGTTCTCA AGATCTGGCC GTTCAGGCGG AAGAAAGCTT CGTAGAAGCT GAATAA
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Protein sequence | MATVSMRDML QAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NEALAELTKI SSRKGKILFV GTKRAASEAV KEAANNCDQF FVNHRWLGGM LTNWKTVRQS IKRLKDLEIQ SQDGTFDKLT KKEALMRTRE LNKLENSLGG IKDMGGLPDA LFVVDADHEH IAIKEANNLG IPVFSIVDTN SDPDGVDFII PGNDDAIRAV KLYLGAVATA VREGRSQDLA VQAEESFVEA E
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