| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1064 |
|---|
| Symbol | |
|---|
| ID | 6091189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1200168 |
|---|
| End bp | 1202906 |
|---|
| Gene Length | 2739 bp |
|---|
| Protein Length | 912 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641596130 |
|---|
| Product | PII uridylyl-transferase |
|---|
| Protein accession | YP_001719818 |
|---|
| Protein GI | 170023313 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCC GGCACCGCCG GCTTTTTTAT GGGCTGCGTT CCTCATCGGG TAAACATATG
TCTGACAATC ACACCGAACA CTCCCTATCG CTGACGCTCA CTCCCACTAT TTCTGAGCAG
CCCGCACTTC CCAGCACTTA TCTTGATAGC GACATCCATT GCCCGATACT GAAGCAACGG
CTTGACGCTT TCCAACGCTG GCAGGCAGAG GCATTTAATA GTGGCACCTC TGCCGAGGTA
TTAATTGCGG CACGCAGTGA TTATATCGAT CATCTGTTAC AGCGGTTGTG GACATTCTAT
GGTTTTGACA AGGTGCCAGA AACAGCTCTG GTTGCGGTCG GTGGCTATGG GCGCGGCGAA
CTGCATCCAT TATCAGATAT TGATGTGTTA GTACTGAGTA AGCAGCGTCT AAATGATGAA
CAGGCGCAAC GGGTTGGCCA ACTCATTACC TTATTGTGGG ATTTGAAGCT GGAAGTCGGT
CATAGTGTGC GCACACTGGA AGAGTGCTTG CTGGAAGGCC TCGCAGATTT AACCATAGCC
ACCAATATGA TTGAGTCACG GTTGATTTGC GGTGATGTCG CCCTTTTTTT ACAGATGCAA
AAACATATTT TCAGTGACAG TTTCTGGCCC TCCCCTCAAT TTTTCCATGC AAAAGTTGTT
GAACAGCAAG AGCGTCATAA ACGCTATCAC GGCACCAGCT ATAATCTGGA ACCCGATATC
AAAAGTAGCC CTGGTGGATT ACGGGATATC CACACATTAC TCTGGGTTGC CCGTCGCCAT
TTCGGTGCGA CATCGTTAAG TGAAATGGTT GATTTTGGGT TTCTCACCAA CGCCGAGCGT
AATGAACTGA ATGAAAGCCA GAGTTTTTTA TGGCGTATCC GTTTTGCGCT GCACCTGGTA
TTGACTCGCT ACGATAACCG CCTGCTGTTT GACCGCCAAC TGAGCGTTGC TCAACTTTTA
CGCTACGAAG GTGAAGGCAA TGAGCCCGTT GAACATATGA TGAAAGATTT CTATCGTATG
ACAAGGCGTG TCAGTGAACT GAACAATATG CTGCTGCAAT TGTTTGATGA AGCCATACTG
GCATTAGATG CGAATGAAAA ACCGCGTCCA CTTGACGAAG AGTTTCAACT ACGGGGAGAT
TTAATTGATC TCCGTGATGA GAACCTATTT GTTCGTCAGC CTGAAGCGAT CATGCGGATG
TTCTATCTGA TGGTGCGCAA TCAGGATATT AAAGGTATTT ACTCCACTAC CGTCCGGCGT
TTGCGCCATG CCCGTCGTCA TCTGAAAGCC CCTTTATGTC ACATTCCTGA AGCTCGTAAG
CTGTTCATGG CCATTTTGCG CCACCCCGGT GCCGTTTCAC GTGCGTTGCT GCCCATGCAT
CGTCACAGTG TTTTATGGGC CTATATGCCG CAATGGGGCA GTATTGTTGG CCAAATGCAA
TTTGATCTAT TTCATGCTTA TACGGTGGAT GAACACACCA TCCGTGTTTT GCTAAAAATT
GAAAGCTTCG CGGATGAAGA TACCCGGCCA CGTCATCCAC TCTGCGTCGA ACTCTACCCT
CGCCTGCCTC AGCCTGAATT ACTGCTGCTG GCCGCCCTGT TTCATGATAT TGCCAAAGGG
CGTGGCGGTG ATCATTCAAT ACTGGGTGCC CACGACGCGG TGGAGTTTGC TGAACAGCAT
GGGCTTAATT CACGCGAATC CCAATTAGTC GCTTGGTTAG TTCGCTGCCA TTTATTGATG
TCAGTGACCG CCCAACGTAG GGATATTCAG GACCCGGCCG TTATTCAGCA ATTTTCTGCC
GAAGTGCAAA GTGAAACGCG CCTGCGCTAT CTGGTCAGCC TGACCGTGGC AGATATTTGC
GCCACCAATG AAAATCTATG GAATAGCTGG AAACAGAGCC TGTTACGCGA ACTGTACTTT
GCGACCGAAA AACAGCTACG CCGCGGAATG CAAAATAGCC CTGATTTACG TGAGCGTGTA
CGCCACCACC GCCTGCAAGC GTTAGCTCTA CTGCGGATGG ATAATATTGA TGAAGAGGCA
CTGCATCGTA TCTGGAGCCG TTGCCGAGCG GATTACTTCC TACGCCACTC GCCGAATCAA
CTTGCCTGGC ACGCCCGCCA TTTGCTGGAG CACGACTCAA CCAAACCGCT AGTCTTAGTC
AGCCGTCAGG CTACCCGTGG TGGGACTGAA ATATTTATCT GGAGCCCTGA CCGCCCATCA
CTCTTTGCCG CTGTTGTTGG GGAGCTTGAT CGCCGCAACT TGAGCGTCCA TGACGCACAA
ATTTTCACCA ATCGTGATGG TATGGCGATG GATACCTTTA TTGTATTGGA GCCAGATGGC
AGCCCGTTGG CACAGGATAG GCATCCAATA ATCAGCCATG CATTACAGCA AGCGATAAAC
CGGTCAGATT ACCAACACCC GCCGCGGGTT AGGCGATTAT CACCTAAATT ACGGCATTTC
AGCGTGCCAA CCGAAGCTAA CTTTTTACCA ACCCATAACG AGCGGCGTAC TTATCTGGAA
TTAATTGCGT TAGATCAACC AGGGTTACTG GCACGTGTTG GCAAAATTTT TGCTGATTTA
GGGTTATCAC TGCACAGTGC ACGTATCACC ACCATCGGCG AGCGAGTAGA GGATTTATTT
GTTTTAGCAG ATAAAGATCG TCGAGCACTG AGCCTTGAAA CCCGTCGTGA ATTAGCACAA
CGATTGGCAG ATACTCTCAA TCCAAACGAT AAACTGTGA
|
|---|
| Protein sequence | MTSRHRRLFY GLRSSSGKHM SDNHTEHSLS LTLTPTISEQ PALPSTYLDS DIHCPILKQR
LDAFQRWQAE AFNSGTSAEV LIAARSDYID HLLQRLWTFY GFDKVPETAL VAVGGYGRGE
LHPLSDIDVL VLSKQRLNDE QAQRVGQLIT LLWDLKLEVG HSVRTLEECL LEGLADLTIA
TNMIESRLIC GDVALFLQMQ KHIFSDSFWP SPQFFHAKVV EQQERHKRYH GTSYNLEPDI
KSSPGGLRDI HTLLWVARRH FGATSLSEMV DFGFLTNAER NELNESQSFL WRIRFALHLV
LTRYDNRLLF DRQLSVAQLL RYEGEGNEPV EHMMKDFYRM TRRVSELNNM LLQLFDEAIL
ALDANEKPRP LDEEFQLRGD LIDLRDENLF VRQPEAIMRM FYLMVRNQDI KGIYSTTVRR
LRHARRHLKA PLCHIPEARK LFMAILRHPG AVSRALLPMH RHSVLWAYMP QWGSIVGQMQ
FDLFHAYTVD EHTIRVLLKI ESFADEDTRP RHPLCVELYP RLPQPELLLL AALFHDIAKG
RGGDHSILGA HDAVEFAEQH GLNSRESQLV AWLVRCHLLM SVTAQRRDIQ DPAVIQQFSA
EVQSETRLRY LVSLTVADIC ATNENLWNSW KQSLLRELYF ATEKQLRRGM QNSPDLRERV
RHHRLQALAL LRMDNIDEEA LHRIWSRCRA DYFLRHSPNQ LAWHARHLLE HDSTKPLVLV
SRQATRGGTE IFIWSPDRPS LFAAVVGELD RRNLSVHDAQ IFTNRDGMAM DTFIVLEPDG
SPLAQDRHPI ISHALQQAIN RSDYQHPPRV RRLSPKLRHF SVPTEANFLP THNERRTYLE
LIALDQPGLL ARVGKIFADL GLSLHSARIT TIGERVEDLF VLADKDRRAL SLETRRELAQ
RLADTLNPND KL
|
|---|
| |