Gene YPK_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1049 
Symbol 
ID6090816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp1186932 
End bp1187372 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content53% 
IMG OID641596115 
Productcysteine desulfurase, sulfur acceptor subunit CsdE 
Protein accessionYP_001719803 
Protein GI170023298 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID[TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCCC CACACCCATT TGGTCGTGAT ATTACGGCTA CTGACCTGAT CGAGAAATTC 
AGTGCTCACA AACAGTGGGA GGATCGCTAC CGTCAGTTAA TTCTGCTGGC CAAGCAACTC 
CCACCGTTGC AGGAGGCATG GAAAAAAAAT GAACTGGAAT TGACGGGTTG TGAAAACAGA 
GTCTGGCTCG GGCACCAACA TTTGCCAGAT GGCACTTTGC ATTTCTATGG CGACAGTGAA 
GGCCGCATAG TACGCGGGCT GCTAGCGGTG ATTCTAACCG CCGTGGAGGG TAAAACACCA 
CAACAGGTGC TGGCCGCAGA CCCCTTGGCC CTGTTTGAGC AACTGGGGCT GCGCCAACAA 
CTCAGCACCT CGCGTGCTAA TGGATTACAA GCACTGGCTC AAGGTGTACA AACCATCGCG 
GCCAAATACG CAGAACGATA A
 
Protein sequence
MIAPHPFGRD ITATDLIEKF SAHKQWEDRY RQLILLAKQL PPLQEAWKKN ELELTGCENR 
VWLGHQHLPD GTLHFYGDSE GRIVRGLLAV ILTAVEGKTP QQVLAADPLA LFEQLGLRQQ 
LSTSRANGLQ ALAQGVQTIA AKYAER