Gene YPK_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1036 
SymbolthyA 
ID6087907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1165731 
End bp1166525 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content47% 
IMG OID641596099 
Productthymidylate synthase 
Protein accessionYP_001719790 
Protein GI170023285 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGT ATCTGGATTT GATGAAAAAA GTGCTGGAAG AAGGCACACC TAAAGCTGAC 
CGTACCGGTA CCGGCACTCT GTCAATTTTT GGGCATCAGA TGCGTTTCAA TTTACAAGAC
GGTTTCCCAT TGGTCACCAC CAAGCGTTGC CACCTACGTT CGATTATCCA TGAGTTGTTA
TGGTTCCTGA ATGGCGATAC CAACATTGCT TATCTGAAGG AAAATAATGT CTCAATCTGG
GATGAATGGG CAGATGAAAA CGGCGATCTT GGTCCGATTT ATGGTAAACA ATGGCGTGCT
TGGGGGGCTG CTGATGGCCG AAAAATTGAC CAGTTGAGTA ACGTAGTCAA TCAACTGAAG
CAGGACCCTG ATTCGCGCCG GATTATTGTT TCTGCGTGGA ATGTGGGCGA ACTGGATCAA
ATGGCGTTGG CACCATGCCA TGCCTTTTTC CAGTTCTACG TGGCTGATGG CAAACTTTCT
TGCCAACTGT ACCAACGCTC TTGCGATGTG TTCCTTGGCT TGCCATTTAA CATTGCCAGC
TATGCGTTAT TAGTTCACAT GATGGCGCAG CAGTGTGATC TGGCCGTAGG CGATTTTGTC
TGGACTGGCG GGGATACTCA CTTGTATAGC AACCATATTG ACCAGACGCA TCTGCAATTG
AGCCGTGAGC CACGAGCATT ACCGAAACTG GTGATCAAAC GTAAACCTGA TTCATTGTTT
GACTACCATT TCGATGATTT TGATATTGAG GGCTACGATC CTCACCCTGG TATTAAAGCC
CCTATCGCGA TTTAA
 
Protein sequence
MKQYLDLMKK VLEEGTPKAD RTGTGTLSIF GHQMRFNLQD GFPLVTTKRC HLRSIIHELL 
WFLNGDTNIA YLKENNVSIW DEWADENGDL GPIYGKQWRA WGAADGRKID QLSNVVNQLK
QDPDSRRIIV SAWNVGELDQ MALAPCHAFF QFYVADGKLS CQLYQRSCDV FLGLPFNIAS
YALLVHMMAQ QCDLAVGDFV WTGGDTHLYS NHIDQTHLQL SREPRALPKL VIKRKPDSLF
DYHFDDFDIE GYDPHPGIKA PIAI