Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1034 |
Symbol | |
ID | 6090294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1162355 |
End bp | 1164601 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641596097 |
Product | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain |
Protein accession | YP_001719788 |
Protein GI | 170023283 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.320203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCATGC GTTTGCGAGA AGTAGTTGAG AAAGTGGCGA TGGCAACCGG CCTGACGGAG GCGTTAGAGC TGTTGGTCAA TGAAACCTGT CTGGCGATGG ACACGGAAGT CTGTTCGATT TATCTGGCAG ACAATGACCG CCGTTGTTAC TACCTAATGG CGACCAGGGG GCTGAAAAAG CCCCGTGGGC GTACTATTAC GCTGGCTTTT GACGAGGGGA TCGTTGGGTT GGTAGGCCGT TTGGCGGAGC CAATTAACCT GGCTGATGCT CAAAGCCATC CCAGTTTTAA ATATGTCCCG CAAGTCAAAG AGGAACGCTA TCGGGCGTTT CTCGGAGTGC CCATTATCTA CCGCCGCCAG TTGCTTGGTG TGCTGGTGGT TCAACAGCGT GAGCACCGTC AGTTTGATGA GAGCGAAGAG TCGTTCATGG TCACGCTGGC AACACAGTTG GCGGGCATCC TTTCTCAATC TCAGCTAAAT GCCATTTTTG GTCAGTATCG CCAAACACGG ATCCGTGCAT TGGCGGCGGC TCCTGGTGTC GCGGTGGCAG AAGGCTGGCA AGATATCTCA CAGCCTTCGC TTGATCTGGT CTATGAGGCC TCAACGCTTG ATAGCACCCT TGAACGTGAA CGTCTGACTC AGGCCTTGGA AGAGGCTGCG GCTGAGTTTC GTCGCTTCAG TAAGCGCTTT GCCGCCAGTT CACAAAAAGA GAGTGCGGCA ATTTTCGATC TCTACTCCCA CTTGCTAAAT GATGCTCGCT TAAAGCGTGA GCTATTTGCG CAAATTGATG CAGGCGCGGT GGCTGAGTGG GCGGTTAAAC AGGTGGTTGA GGCGTTTGCT GCCCAGTTTG CCAGTCTGCA AGATACCTAT ATGCGCGAGC GTGCTAGTGA CCTGCGGGCA TTAGGCCAAC GCTTGTTGTT CCATCTTGAT GACAGTACCT CTGGAGCCAG CCAGTGGCCT GAGCGCTTTA TCCTGGTTGC TGATGAACTT ACTGCGACAT TGCTCGCCGA GGTGCCACAG GACCGCTTGG CGGGGGTTGT GGTGCGTGAT GGTGCCGCCA ACTCTCATGC GGCTATTTTG GTCCGGGCAA TGGGTATCCC GACAGTGATG GGGGCGGATA TCCAGCCTGC ATTACTCAGC CAGCGGCTGC TGATTGTTGA TGGTTATCGT GGCGAAGTAT TAGTTGATCC TGAACCGGTA CTGGTCAAAG AGTACCAACG GCTGGTCACC GAAGAGATTG AACTCAGTAA ACTGGCTGAA GATGATGTTG AGCAACCTGC GGCCCTAAAA AGTGGTGAGC GGATCCAGGT GATGCTAAAC GCGGGCCTTA GTCCAGAACA TGAACAATTA CTGGGAGGGA GGGTTGATGG TGTAGGCCTG TACCGCACAG AAATACCGTT TATGTTGCAA AGTGGTTTCC CGTCGGAAGA AGAGCAAGTT GCGCAATACC AAGGCATGTT ACAGCTTTAT CCACAAAAGC CCGTGACCTT GCGTACCTTG GATATCGGTG CGGATAAGCA GCTCCCCTAC ATGCCTATCA GCGAGGAGAA CCCTTGTCTG GGCTGGCGCG GCATTCGTAT CACCCTGGAT CAACCCGAAA TCTTTTTGAT TCAGGTAAGA GCAATGCTCA GAGCTAATGC CGGGACCGGT AATTTAGGTA TTTTATTGCC GATGATCACC AGTATCGAAG AGGTTGATGA AGCGAAACGT TTGATTGACC GTGCGGGTCG CGAAGTAGAG GAAATGCTCG GTTATGTGCT GCCACAACCT CGGTTGGGGG TGATGATTGA AGTTCCATCC ATGATTTTCA TGCTGCCTTA CTTGACGTCT CGGGTGGATT TTATCTCGGT TGGCACCAAT GATCTGACGC AATATTTACT GGCCGTTGAT CGCAACAATA CCCGGGTGGC TTCGTTGTAC GACAGCCTCC ACCCAGCGAT GTTACAAGTG CTTCGCCAAA TTCTGATGCA GGCAACAGAG TCTGGCCTGC AAGTCAGTCT TTGTGGTGAA ATGGCCGGTG ATCCGATGGG GGCGTTACTG CTGGTTGGGC TGGGTTACCG TAATCTCAGT ATGAACGGCC GCAGTGTGGC ACGCATCAAA TACCTGTTAC GTAATATAGA ATTGGCCGAT GCACAAGCGC TGGCGGCACG GGTATTAACC GCGCAGATGA CCACCGATGT GCGCCACCTA ACCGCTGCAT TTATGGAGCG CCGTGGTTTA GGTGGGCTGA TTCGGGGTGG GAAGTAG
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Protein sequence | MLMRLREVVE KVAMATGLTE ALELLVNETC LAMDTEVCSI YLADNDRRCY YLMATRGLKK PRGRTITLAF DEGIVGLVGR LAEPINLADA QSHPSFKYVP QVKEERYRAF LGVPIIYRRQ LLGVLVVQQR EHRQFDESEE SFMVTLATQL AGILSQSQLN AIFGQYRQTR IRALAAAPGV AVAEGWQDIS QPSLDLVYEA STLDSTLERE RLTQALEEAA AEFRRFSKRF AASSQKESAA IFDLYSHLLN DARLKRELFA QIDAGAVAEW AVKQVVEAFA AQFASLQDTY MRERASDLRA LGQRLLFHLD DSTSGASQWP ERFILVADEL TATLLAEVPQ DRLAGVVVRD GAANSHAAIL VRAMGIPTVM GADIQPALLS QRLLIVDGYR GEVLVDPEPV LVKEYQRLVT EEIELSKLAE DDVEQPAALK SGERIQVMLN AGLSPEHEQL LGGRVDGVGL YRTEIPFMLQ SGFPSEEEQV AQYQGMLQLY PQKPVTLRTL DIGADKQLPY MPISEENPCL GWRGIRITLD QPEIFLIQVR AMLRANAGTG NLGILLPMIT SIEEVDEAKR LIDRAGREVE EMLGYVLPQP RLGVMIEVPS MIFMLPYLTS RVDFISVGTN DLTQYLLAVD RNNTRVASLY DSLHPAMLQV LRQILMQATE SGLQVSLCGE MAGDPMGALL LVGLGYRNLS MNGRSVARIK YLLRNIELAD AQALAARVLT AQMTTDVRHL TAAFMERRGL GGLIRGGK
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