Gene YPK_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1032 
Symbol 
ID6089908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1160432 
End bp1161118 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content53% 
IMG OID641596095 
ProductDNA mismatch repair protein 
Protein accessionYP_001719786 
Protein GI170023281 
COG category[L] Replication, recombination and repair 
COG ID[COG3066] DNA mismatch repair protein 
TIGRFAM ID[TIGR02248] DNA mismatch repair endonuclease MutH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000109163 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTTT ACTCTTTGCC TCCTGCTCCC CCCAGTGATG AACATCAACT TTTTCAACGT 
GCACAGGCAT TGTCTGGTTT TACCCTGGGT GAATTAGCAA CACGTGCCCA GTGGGTCATC
CCCGCAGACC TAAAACGCGT AAAAGGTTGG GTTGGGATGC TGTTGGAGTT CTATCTAGGC
GCCAGTGCTG GCAGTAAACC AGAGCAGGAT TTCGCCGATA TCGGCATCGA GCTGAAAACC
ATCCCGATCA GTGCACAAGG AAAACCACTG GAAACGACAT TCGTCTGCGT GGCACCACTC
ACCGGGAATA GCGGTGTCAC CTGGGAAAGT AGCCATGTGC GTCATAAGCT TGCCAGAGTG
TTATGGGTGC CCGTCGAAGG CGAACGGCAT ATTCCGTTAG CAGAACGCCG AGTCGGTGCT
CCGCTGCTGT GGAGCCCTAA TGTAGAAGAA GAAGAGTTAC TGCGCCGCGA TTGGGAAGAA
CTCATGGATC TGATTGTTTT GGGTAAAGTC GAAAGCATCA CGGCTCGCCA TGGTCAGGTG
TTACAGTTGC GCCCCAAAGC AGCCAATAGC CGGGCATTAA CAGAAGCCAT CGGCGAATTT
GGGCAGCCTA TCATGACCTT GCCACGTGGC TTTTATCTGA AGAAGACACT GACCGCGCCG
ATGCTGGCTC GCCACTTTTT GCTGTAG
 
Protein sequence
MSVYSLPPAP PSDEHQLFQR AQALSGFTLG ELATRAQWVI PADLKRVKGW VGMLLEFYLG 
ASAGSKPEQD FADIGIELKT IPISAQGKPL ETTFVCVAPL TGNSGVTWES SHVRHKLARV
LWVPVEGERH IPLAERRVGA PLLWSPNVEE EELLRRDWEE LMDLIVLGKV ESITARHGQV
LQLRPKAANS RALTEAIGEF GQPIMTLPRG FYLKKTLTAP MLARHFLL