| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1024 |
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| Symbol | |
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| ID | 6090399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1149238 |
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| End bp | 1150500 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641596087 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001719778 |
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| Protein GI | 170023273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCG CACTGAATGA CCGTTCTTCA GCACTGACTG CCCAAAATCT GATTGCATTG
CCTGAGCGTT TTGGTTGCCC GGTGTGGGCC TATGATGGTG ATATTATTGC TGAGCGTATT
AATCAGTTAC GCCATTTTGA TGTTATCCGC TTCGCGCAAA AAGCCTGTTC GAATATCCAT
ATACTGCGCC TGATGCGTGA GCAAGGCGTT AAGGTTGATT CGGTATCTTT GGGTGAAATC
GAGCGTGCCT TGCACGCGGG TTATCAACCG GGGCAGGAAC CTGCCGAAAT TGTTTTCACG
GCTGATTTAC TGGATCAGGC GACCTTATTG CGCGTTACTG AATTGAATAT CCCGGTCAAT
GCCGGGTCTA TCGATATGTT GGATCAACTG GGGCAACAGG CTCCGGGTCA CCCTGTTTGG
CTGCGCGTCA ATCCGGGTTT TGGTCATGGG CATAGCCAGA AAACCAATAC CGGCGGTGAA
AACAGCAAAC ACGGCATTTG GCATGAAGAA CTCCCTCGCG CACTCAAGAA AATTGAGCAC
TATGGCTTAA CACTGGTGGG GATTCATATG CATATTGGCT CGGGTGTCGA TTATCAACAC
CTTGAGCAAG TCTGCGATGC CATGGTTCAG CAAGTGATTA CCTTAGGGCA CGATATCAGT
GCTATCTCTG CTGGCGGTGG GTTATCGATC CCCTATCAGT TTGGCGATGA TATTATTGAT
ACTGAACACT ATTATGGGTT ATGGAATAGC GCCAGAGAGC GAATTGCTGC TCATTTGGGC
CACCCGGTTA GCCTTGAAAT TGAACCTGGC CGCTTCCTGG TAGCAGAGTC TGGTGTATTG
ATCGCTCAGG TTCGTGCTGT TAAGGATATG GGCCGCCGGC ATTATGTCTT GGTTGATGCC
GGGTTTAACG ATCTGATGCG CCCAGCGATG TATGGCAGTT ATCACCATAT TTCATTGCTT
CCTGCCGATG GGCGCGACCT GGCGTCAGCT CCGCTGATTG ATACCGTGGT TGCTGGCCCG
CTTTGTGAAT CTGGCGATGT CTTCACTCAG CAAGAGGGCG GAGGCGTGGA GACCCTTGCT
CTGCCTGCTG CGGTTATTGG CGATTATCTG GTCTTCCATG ATACGGGGGC TTATGGCGCG
TCGATGTCAT CTAACTACAA CAGCCGCCCG TTATTACCTG AAGTACTGTT TGAAAAGGGC
CAACCGCGCT TGATCCGCCG CCGTCAAACC ATTGAAGAAT TGATTGACCT GGAACGCGTT
TAA
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| Protein sequence | MPRALNDRSS ALTAQNLIAL PERFGCPVWA YDGDIIAERI NQLRHFDVIR FAQKACSNIH
ILRLMREQGV KVDSVSLGEI ERALHAGYQP GQEPAEIVFT ADLLDQATLL RVTELNIPVN
AGSIDMLDQL GQQAPGHPVW LRVNPGFGHG HSQKTNTGGE NSKHGIWHEE LPRALKKIEH
YGLTLVGIHM HIGSGVDYQH LEQVCDAMVQ QVITLGHDIS AISAGGGLSI PYQFGDDIID
TEHYYGLWNS ARERIAAHLG HPVSLEIEPG RFLVAESGVL IAQVRAVKDM GRRHYVLVDA
GFNDLMRPAM YGSYHHISLL PADGRDLASA PLIDTVVAGP LCESGDVFTQ QEGGGVETLA
LPAAVIGDYL VFHDTGAYGA SMSSNYNSRP LLPEVLFEKG QPRLIRRRQT IEELIDLERV
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