Gene YPK_1007 details

Gene Information

• Locus tag: YPK_1007
• ID: 6087348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1134905
• End bp: 1135342
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 641596070
• Product: general secretion pathway protein G
• Protein accession: YP_001719761
• Protein GI: 170023256
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAACA AAAAAACAAA AGGATTTACA TTGTTGGAAA TTATGGTGGT TATTGTTATT 
CTGGGCCTAC TTGCTAGCTT AACAATACCC AGTCTGATGT CTAATAAAAA TAGGGCGGAC 
CAACAGAAAG CAGTAAGTGA TATTAGTGCG CTGGAAAATG CATTAGATAT GTATAGATTA 
GATAACGGGG ATTATCCGAC CGAGCAGCAA GGCATTGCTG CTTTAGTAAC TAAACCCAAC 
GTTCCCCCAT TACCGCAGAG ATATCCATCC GATGGTTATA TCCGGCGTTT ACCAACAGAT 
CCATGGGGGA ATTCTTACCA AATGAATAAC CCAGGAAAAC ATGGCCAGAT AGATATATTT 
TCAATAGGAC CTGATAGGTT ACCGGAAACT GAGGATGATA TTGGTAATTG GATTACTTTA 
TCTATCAGTG AGACATAG 

 

Protein sequence

MANKKTKGFT LLEIMVVIVI LGLLASLTIP SLMSNKNRAD QQKAVSDISA LENALDMYRL 
DNGDYPTEQQ GIAALVTKPN VPPLPQRYPS DGYIRRLPTD PWGNSYQMNN PGKHGQIDIF 
SIGPDRLPET EDDIGNWITL SISET