Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1002 |
Symbol | |
ID | 6090755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1129196 |
End bp | 1129612 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 641596065 |
Product | putative transcriptional regulator, CadC |
Protein accession | YP_001719756 |
Protein GI | 170023251 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATGTTG ATACGGTTTC TGTTGTCTCT GGTAGTAAAT TCATTGATAT CAATGGTAAA GGAGTCATTG ATTATGAAAA AGAGATGTCT TTGGATTGCT GTATGAATAA AATCCATTTT CACACGAGAA AAGTTAGCAT TGATATTAAT GAGAAACAAA AAAGACTGGT TATGTGTTTG TTTAACGATG TAAATAGAAA GCAAGATATT ATAAAAGTAG TCTGGTACGA AAACCATAAA AGTATTTCAG ATAATAACTA CCACCAATTA ATTCATAAGT TTAGAGTGCA TTTGAAAAGT TTTGGGATAC CTGAAGGCAT TATTAAAACA ATAAATAGAT ATGGAATTAG ACTTGATCCG AGTTTATTAA TAACAGTTAT GTCCACTAAG ATGAATGAGA GATTTAGTGG TTATTAA
|
Protein sequence | MYVDTVSVVS GSKFIDINGK GVIDYEKEMS LDCCMNKIHF HTRKVSIDIN EKQKRLVMCL FNDVNRKQDI IKVVWYENHK SISDNNYHQL IHKFRVHLKS FGIPEGIIKT INRYGIRLDP SLLITVMSTK MNERFSGY
|
| |