Gene YPK_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1002 
Symbol 
ID6090755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1129196 
End bp1129612 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content29% 
IMG OID641596065 
Productputative transcriptional regulator, CadC 
Protein accessionYP_001719756 
Protein GI170023251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGTTG ATACGGTTTC TGTTGTCTCT GGTAGTAAAT TCATTGATAT CAATGGTAAA 
GGAGTCATTG ATTATGAAAA AGAGATGTCT TTGGATTGCT GTATGAATAA AATCCATTTT
CACACGAGAA AAGTTAGCAT TGATATTAAT GAGAAACAAA AAAGACTGGT TATGTGTTTG
TTTAACGATG TAAATAGAAA GCAAGATATT ATAAAAGTAG TCTGGTACGA AAACCATAAA
AGTATTTCAG ATAATAACTA CCACCAATTA ATTCATAAGT TTAGAGTGCA TTTGAAAAGT
TTTGGGATAC CTGAAGGCAT TATTAAAACA ATAAATAGAT ATGGAATTAG ACTTGATCCG
AGTTTATTAA TAACAGTTAT GTCCACTAAG ATGAATGAGA GATTTAGTGG TTATTAA
 
Protein sequence
MYVDTVSVVS GSKFIDINGK GVIDYEKEMS LDCCMNKIHF HTRKVSIDIN EKQKRLVMCL 
FNDVNRKQDI IKVVWYENHK SISDNNYHQL IHKFRVHLKS FGIPEGIIKT INRYGIRLDP
SLLITVMSTK MNERFSGY