Gene YPK_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1001 
Symbol 
ID6090035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1127698 
End bp1128453 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content42% 
IMG OID641596064 
Productcarbonic anhydrase 
Protein accessionYP_001719755 
Protein GI170023250 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.936543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA TAACGGATTG TTGTTCAGAA GAAAATCATC CCAATAGTAG ACGAAGCGTA 
TTGAAAGCTG CCTTGGGCAT GACTGCTGCA GGCGTTATCG GAGGAATAGG TCTGGGGTTG
CCCCAAATAT CTTATGCTGC GGCATTGACC CAAGAAGAAC GGGATAAGTT AACGCCAGAT
CAGATAGTTG AAAGCTTAAA GCAGGGTAAC AAGCGATTTA CATCTGGCAA AGCACTGCAG
CATGATTATC TCGCACAAAA ACGTGCCAGT GCAGAAGGGC AATTTCCAGC AGCAGTCATA
TTGAGTTGTA TCGATTCCAG AGCACCGGCA GAGATTATTT TAGATACGGG GATCGGTGAG
ACATTTAATG CTAGAGTTGC CGGTAATATT GCTAATGATG ATTTAATTGG CAGTTTGGAA
TTTGCCAGTG CGGCGGCTGG CGCTAAAGTT ATACTAGTGA TGGGGCATAC CGCTTGTGGC
GCAATAAAAG GCGCGATAGA CAACGTTGAA CTGGGTAATC TGACGGGGCT TCTCAATAGA
ATCAAACCGG CAATTGAAGT GACCCAATTT GATGGTGAAA AAAGCAGTAA GAATGAAAAA
TATGTGGATG CCGTAGCCAA AACCAACGTC AAAAATACTA TGGATGAAAT TCGTAAGAAT
AGCGAAATAA TCAGGAAGTT AGAACAAGAA GGGAAAGTTA AAATCGTTGG AAGTATGTAT
AATTTAAATA ATGGAGAAGT TGAATTTTTC ATGTAG
 
Protein sequence
MSKITDCCSE ENHPNSRRSV LKAALGMTAA GVIGGIGLGL PQISYAAALT QEERDKLTPD 
QIVESLKQGN KRFTSGKALQ HDYLAQKRAS AEGQFPAAVI LSCIDSRAPA EIILDTGIGE
TFNARVAGNI ANDDLIGSLE FASAAAGAKV ILVMGHTACG AIKGAIDNVE LGNLTGLLNR
IKPAIEVTQF DGEKSSKNEK YVDAVAKTNV KNTMDEIRKN SEIIRKLEQE GKVKIVGSMY
NLNNGEVEFF M