Gene YPK_0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0991 
Symbol 
ID6090765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1112670 
End bp1113458 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID641596054 
Productphosphotransferase system PTS sorbose-specific IIC subunit 
Protein accessionYP_001719745 
Protein GI170023240 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTTG AAGCTACGTT AGTCGGAATC TGGGCCTTCT TGTGCGGTAT CGACAAGTAT 
GACGTTGCCC TGAATATTCA CCGCCCGTTG ATCACCGGCC CAGTTGTCGG TTTGATCATG
GGCAATATGG AAGTGGGTTT AATCGCAGGT GCAACACTGG AGCTGGCTTG GCTCGGCCTG
GTACCGAATG CGGGGGCTCA GCCACCCGAT GTGACCATGG GGACTATCGC CGCAGTTGCC
TTTGCGGTGA TGACCGGCCA GTCGCCAGAA GTGGCAATGG GCGTTGGTAT GCCAATTGCG
GTCCTGATGC AGATGATTAT TATCGGTTTC TTTGCCATGA CAGCGTTCAC CATGGGCAGA
GCAGATAAGT ATGCAGAGCA GGCAGATACG GCGGGCATAT CGCGCTTGTT GATAGGCACG
CTACTCACCC GGTCGATGCT CTATTTTGTG ATCGCCTTTG TCACCGTCTA CTTCGGTGAA
CATGCGGCAA CCTGGATTGA TGAAAATACA CCAACCGCCC TGTTAGAAGG CTTAGGTATC
GGTGCGAAGA TGGTTCCGGC AATCGGCTTT GCTATGTTGC TGAAAATTAT GTGGTCGAAA
GAAGTGGCTG GTGTGTTCTT TATCGGCTTT GTGATGACGA CTTACCTGAA ACTGCCAATC
ATGGCTATCG CCATTCTGGG TGCTGCTGTT GCTGTCCTGT ACTACTTCTT CAGTGGCAAC
AATAACGGCA GCAATAACAA CGGTAACAAC ACCAACAAAC AACCAGAGGA TTTCGAAGAT
GGCATCTGA
 
Protein sequence
MLFEATLVGI WAFLCGIDKY DVALNIHRPL ITGPVVGLIM GNMEVGLIAG ATLELAWLGL 
VPNAGAQPPD VTMGTIAAVA FAVMTGQSPE VAMGVGMPIA VLMQMIIIGF FAMTAFTMGR
ADKYAEQADT AGISRLLIGT LLTRSMLYFV IAFVTVYFGE HAATWIDENT PTALLEGLGI
GAKMVPAIGF AMLLKIMWSK EVAGVFFIGF VMTTYLKLPI MAIAILGAAV AVLYYFFSGN
NNGSNNNGNN TNKQPEDFED GI