| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0990 |
|---|
| Symbol | |
|---|
| ID | 6090774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1111790 |
|---|
| End bp | 1112680 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641596053 |
|---|
| Product | PTS system mannose/fructose/sorbose family IID component |
|---|
| Protein accession | YP_001719744 |
|---|
| Protein GI | 170023239 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCTG ATATCACCGT AGATAAAGAC CACACGGCAA AAGCGAAAAC GGACAGCTTG
GTGGACAAAA TTGATTCCTA TCAGGATCTT GAAGTTCGCA AAGTGGTTAC CCGTAAAGAT
CTGTGGAAGT GCGCCATCCG TGGCCTGTTC ATGGAAGGTA ACTTTAACTT CGAACGTATG
CAGGCCGGTG GTTTTGCTTA TTCGATGATC CCCGCGTTGA AGAAAATCCA CGGTAACAAC
CGTGCAGATT TGGCGAAATC GCTAAAGAAC CATTTGCAGT TCTTTAATGC CAGTCCAAAG
CTGTTCACCT TCCTGTTAGG CACTGCGGTG GCGATGGAAG AGAACAAAGA AAAGCCGTCA
ATGATCAACG TAATGAAAGT TGCGGGCATG GGGCCAACAG GCGGTATCGG CGATGCCATT
GACCACATGA CGCTGATGCC ACTGACGCTG GCGCTGGGGG CTTCTATTGC GATTGAAGGC
TCCATCGCTG GCCCATTTGT GTTCTTCATT CTGTACCAGA CTGTGCACTT CTTGGTCTAT
TTCGGCCTGA TGTTTATGGG CTACCGCGCG GGCACGGCGG CAATGGTGAA CATGGGGGAT
GCCACGGAGA AACTGGCAAA AGCCGCCAAT ATCATGGGTA TCTTTGTTAT CGGCGCGTTG
TGCGCCACCT TTATCAGGCT ACAAACTACC GCGGCGATAG ATCTTGGCGG GAAAACAGTG
GAGCTACAAA CCGCCCTGTT TGACAAGATC ATGCCGAATT TACTCCCGCT GGCATTGGTG
TTCTTTATGT TCAAGATGGT GAAAGGCACG GGTTTCTGGG CGAAACCACC GGTGTTGATT
TTCTCCACGC TGGCGGCCGG GGTCGTCGGT CATCTGCTGG GCATTGTCTA A
|
|---|
| Protein sequence | MASDITVDKD HTAKAKTDSL VDKIDSYQDL EVRKVVTRKD LWKCAIRGLF MEGNFNFERM
QAGGFAYSMI PALKKIHGNN RADLAKSLKN HLQFFNASPK LFTFLLGTAV AMEENKEKPS
MINVMKVAGM GPTGGIGDAI DHMTLMPLTL ALGASIAIEG SIAGPFVFFI LYQTVHFLVY
FGLMFMGYRA GTAAMVNMGD ATEKLAKAAN IMGIFVIGAL CATFIRLQTT AAIDLGGKTV
ELQTALFDKI MPNLLPLALV FFMFKMVKGT GFWAKPPVLI FSTLAAGVVG HLLGIV
|
|---|
| |