Gene YPK_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0989 
Symbol 
ID6090770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp1111264 
End bp1111704 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content50% 
IMG OID641596052 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_001719743 
Protein GI170023238 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGGA TTGTTGTTTC TGGCCACATT AATTTTGCTT CTGGTATGGC TTCCGCAGTA 
CGGGCGATTA CCGGTGAGCA ATCTCAAATG CTGTTCATTG ATTTCGTTGA AAGTATGTCA 
ACAGATATGC TGGAAAGCGA ACTGCGCCGT GCGGCACATG AGGTAGACAG CGGCGAAGGT 
GTACTGTTTT TAACCGATAT TCCCGGTGGC TCACCTTGTA ATCGCGCACT GAATATTTTG 
ATGAGCGGCA GCAACGTTGA GCTGCTTGCC GGGGTTAACC TGCCAATGAT TGCGAATGCC 
GCCTTTGAAC GTGAAGGGGC TTCACTGTCA GAGCTGGTCG AAATACTGAT GGATATTGGC 
GCGTCCAGTG TACAGAACCT ACGGGCTGAG CTGGACACCG CTCTGGTTAC TGATAGCGGC 
GAAAACGAGG ATGGGCTCTA A
 
Protein sequence
MIGIVVSGHI NFASGMASAV RAITGEQSQM LFIDFVESMS TDMLESELRR AAHEVDSGEG 
VLFLTDIPGG SPCNRALNIL MSGSNVELLA GVNLPMIANA AFEREGASLS ELVEILMDIG 
ASSVQNLRAE LDTALVTDSG ENEDGL