Gene YPK_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0986 
Symbol 
ID6090695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1108070 
End bp1109128 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content54% 
IMG OID641596049 
Productglycosy hydrolase family protein 
Protein accessionYP_001719740 
Protein GI170023235 
COG category[R] General function prediction only 
COG ID[COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA TGACACAGCA GACGCGTACT CAACAGGCGC GTGAAACAAT GAAGCGGGTA 
TATCGCTATC AGGCAGCAAA CCAAACACGT AGTGTGATCC GTCGGAGTGG CAAGACGCGT
TTTATTAAAG ACACAGACTG GGAGCGTGGT GTGTTCTGGT CATGCGTTGC CGCCGCTTGG
CTGGCAACCG ATGACGCCGA GTATCTGGAG GGCGTCATGA ATTACACGCT GCATACCGGG
TTCCGCCCTG GACCCAATCT GCGCTTTGCC GATGACCTGA TTTGCTGTCA GGCCTATCTG
GATGTCTGGC CGCAGATAGC CGTACCGGAA GCATTAGAGC CAACCATCAA AGCCGTCTCT
GCCATGGTGG ACGAGCCAAA GCCGGGGCGT GAAGATTGGT GGTGGTGTGA CTCATTGTTT
ATGGCCCCCG CCACCTTTGC AGCATTGAGC CAACGTACCG GTGACGCCCG TTATCTGGCT
TATATGGACA CCGCATTCTG GGATGCAGTT GATTATCTGC GCGACCCTGA CAGCGGTTTG
TTCTACCGCG ATCATCGCTA TATTCCTGAC GGTAACGGCA CTGAGCTGCG TGAAGAAAAT
GGCGAGAAAG TGTTCTGGAG CCGGGGTATT GGCTGGGTAC TGGCTGCCAT CCCACGCCTG
CTCGCGCGGA TGCCAGAAGA TTATACCGGT CGTCAGCGTT ATCTCGATCT GTTTACTGAT
CTGGCAGATA ACGTGATCCG TTACCAGCAA GCGGATGGTT TATGGCGTAC CAGTCTGCTC
GATCCTCAGC GGTTTCCTGC CCCAGAGAGC AGTGCAACAG CGCTGTTTTG CTACGGGCTG
AGCTGGGGAA TTAACCAAGG TATTCTGGCA CCAGAAACCT ATCTGCCTGT GGTGGAAAAA
GCCTGGGATG CCCTGCAAGG CTGTATCCAC GATAACGGCA TGATGGGTTG GGTTCAGCTA
CCGGCCTTTA ATCCTCGTGA TGTGAAATTT GAGCACAACA TGGATTATGG CGCAGGGGCT
TATTTATTGG CCGCGTCGGA AATGTTACGT CTGGCCTAA
 
Protein sequence
MSNMTQQTRT QQARETMKRV YRYQAANQTR SVIRRSGKTR FIKDTDWERG VFWSCVAAAW 
LATDDAEYLE GVMNYTLHTG FRPGPNLRFA DDLICCQAYL DVWPQIAVPE ALEPTIKAVS
AMVDEPKPGR EDWWWCDSLF MAPATFAALS QRTGDARYLA YMDTAFWDAV DYLRDPDSGL
FYRDHRYIPD GNGTELREEN GEKVFWSRGI GWVLAAIPRL LARMPEDYTG RQRYLDLFTD
LADNVIRYQQ ADGLWRTSLL DPQRFPAPES SATALFCYGL SWGINQGILA PETYLPVVEK
AWDALQGCIH DNGMMGWVQL PAFNPRDVKF EHNMDYGAGA YLLAASEMLR LA