Gene YPK_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0983 
Symbol 
ID6090309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1103362 
End bp1104849 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content50% 
IMG OID641596046 
Producthypothetical protein 
Protein accessionYP_001719737 
Protein GI170023232 
COG category[S] Function unknown 
COG ID[COG4289] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTG ATATTAGCGC CAAACCCCGT CCGATCATTC CTTATGAACA TCCTAATGCG 
GCGATGTATT ACCAGTTGTT TAAACAACAT ATGATCCGCC AGTGGCATAA AAAACGGCCT
TATGCGAGAC ATGATGCGCG CTTACAAGCC CTGTTTCAGA ATCAAAAGGT GTCGCTGCAA
AGCCAGTGTG ATTACCTGGT GCGTTATGTG GCTGAAGCAT TTGATCATTA TGCCGTCTGG
GATTATACCC ATGCTTATTA TCCGGGGCGC CCCAGCCAGC AAAATGCGCG CACGGATGCA
CTGGAAGGCG TAAGCCGTGT CCTGCCGACG CTAGCGGCCT GGTTACACAG CCAACCTACG
GGGCTGGATA ATACGCGACT TGCTGATCTG AAAGGCGGGG AGCTCGACAT TGTGGCTATC
TTACGTCGCG CGTTCTTAGC CGGGACTGAC CCGACCCATC GTGGATATTG GGGCACGCTG
CATGATTATG ATCAGCGTAT TTGTGAAAGT GCAGACTTGG CATTGGCTTT ATGGTTGAGC
CGTGAGTCGG TCTGGCAGGC GTTTACGCCA CCAGAACAGC AACAAGTGAC ACGCTGGTTC
AGCCAGGTTA ATACGCTGCA AACGGTGGAT AATAACTGGC ATCTCTTCCC GTTAACGGTT
CAGTTTGTGA TGCGATCACT GAACGGCACT GGCGATATCA GTGATGATAA ATACCAGCGC
ATCAAAGAGT TCCATGTCGG TGAGGGCTGG TTTCGCGACG GAGCACAGGG CAATTATGAT
TACTATAACG CTTGGGGATT CCACTACTCT CTCTATTGGC TCGATCAAAT AAATCCGGAT
TATGACCGAC AGTTTATTCG TTCCTGCATG GCAGAATTCG TCGCCGCTTA TCGCTATCTG
ATCACCCCAC AAGGGATCCC CTGCTTTGGC CGTAGTGCCT GTTATCGCCT GGCGGTATCA
GCGCCGTTAC TGGCGGTGGC CAGTCACTCA ACAGACCCCG TTCATACCGG TGAAGCCAAA
AGAGCATTAG AAGCCACACT GCGTTATTTC ATTGGTCACG GAGCCATGCG CTTCGGTGCT
CCCACACAGG GATTATTCGC AGATGATGAA AGGCTGGTGG ACAACTACAG TGGGCCAGCT
AGCAGTTTTT GGTCACTGCG GGCGTTGAAT ATTGCGCTGT ATTGCGCCAA TGACTGTGGG
TTATGGCAGT GTGAAAGTAG CAAATTACCT GTCGAGACCG AGGATTTTAG TTTCACTATT
AATGCCATCG ATCTCTTTGT TATGGGAACT TTCGAAACGA AAGAGGTGAT TGTTACTTTT
CGTCATGATT ACACCAAAGA GCAGACACCA CTGACCCGTC GTTTAGTGTC ACAACCGTGG
TTAGAGCGTG TGAAAGAGAA CGTTACTGGC CGTGCTGAAC GGCCGAAAAA CAATTTACTC
CGCAAAGGCG TAACCAGCTA CAGCTCAAAA ATGACGTCAC TCTTTTAA
 
Protein sequence
MSVDISAKPR PIIPYEHPNA AMYYQLFKQH MIRQWHKKRP YARHDARLQA LFQNQKVSLQ 
SQCDYLVRYV AEAFDHYAVW DYTHAYYPGR PSQQNARTDA LEGVSRVLPT LAAWLHSQPT
GLDNTRLADL KGGELDIVAI LRRAFLAGTD PTHRGYWGTL HDYDQRICES ADLALALWLS
RESVWQAFTP PEQQQVTRWF SQVNTLQTVD NNWHLFPLTV QFVMRSLNGT GDISDDKYQR
IKEFHVGEGW FRDGAQGNYD YYNAWGFHYS LYWLDQINPD YDRQFIRSCM AEFVAAYRYL
ITPQGIPCFG RSACYRLAVS APLLAVASHS TDPVHTGEAK RALEATLRYF IGHGAMRFGA
PTQGLFADDE RLVDNYSGPA SSFWSLRALN IALYCANDCG LWQCESSKLP VETEDFSFTI
NAIDLFVMGT FETKEVIVTF RHDYTKEQTP LTRRLVSQPW LERVKENVTG RAERPKNNLL
RKGVTSYSSK MTSLF