| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0976 |
|---|
| Symbol | lacI |
|---|
| ID | 6090341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1095033 |
|---|
| End bp | 1096106 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641596039 |
|---|
| Product | lac repressor |
|---|
| Protein accession | YP_001719730 |
|---|
| Protein GI | 170023225 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGA AAAGCACCAC ATTAGAAGAT GTTGCCCGCC ATGCAGGTGT TTCTTATCAA
ACGGTTTCTC GGGTACTGAA TAAATCGGCC AAAGTATCCG AAGCTACTCG TCGCAAGGTT
GAGCAGTCAA TTGAGCTGCT GCGTTATGTA CCCAACCGCC TTGCCCAACA ATTGGTTGGT
AAGCAAAGTA TGACGATGGG TCTGGTGACC ACGTCACTCG CGTTACATGC TCCATCACAG
GTCGCCGCAG CAATAAAACG CTACGCGCAT ATTGAAGGTT ATCAAGTACT GATTTCTATG
ATTGATGAGA GCGTCAATCA AAGCATTCAA CATTCGATTA ATGACCTAAA ATCTCAGTGG
GTAGGCAAGG TCATTATCAA TGTCCCTCTA GAGACGGCTG TAGCAGAGAA AATCGCTGCA
GATAATGATG ATGTCACTTG TTTGTTTCTC GATGTTGACC CCTATAGCTC TGTGTTTAAC
GTTTCGTTTA ACCCGGCAGA TGGCACCCGT GCCAGCGTCA AATATCTTTA TGAATTGGGG
CACCGTGAGA TTGCGTTGCT GGCAGGGCCT AAGCAGTCGG TATCGGCAAA TTTGCGGCTT
AAAAGCTGGC TAGAGACGCT GGCCGATTAT GGTTTATCGC CTGTCAGTGT GATCCATGGA
AACTGGGATG CCCAAAGTGG GTATTCAGGC GCATTACAGA TGTTGCGTGA AACACCGCAG
TTCAGTGCCG TGCTGGTGGC CAATGATCAA ATGGCGCTTG GGGTATTGAG TGCGTTTCAT
CAAAACCAAC TGGCGGTACC GGGAGAGAAG TCGGTCATTG GTTACGATGA TACTTATGAA
AGTTCGTTTT TCTACCCGGC CCTCACTACC GTGTCACTTG ATTTAGATTT ACAGGGAAAA
GAGGCGGTTC GGCGTATGCT TAGCGCCAGT GATAACGAGT CCATGCGCTC TTCATCGATA
CTGCCTGCCA AACTGGTCGT GCGCAATTCC ACTGGGCCTC AGGCTAAAGA GCACCGTGAT
TTACAAAAAA TTGCCGAAGA GTTGCGCCTT ATTGCTCAGC GTTTGGCCAG TTGA
|
|---|
| Protein sequence | MKSKSTTLED VARHAGVSYQ TVSRVLNKSA KVSEATRRKV EQSIELLRYV PNRLAQQLVG
KQSMTMGLVT TSLALHAPSQ VAAAIKRYAH IEGYQVLISM IDESVNQSIQ HSINDLKSQW
VGKVIINVPL ETAVAEKIAA DNDDVTCLFL DVDPYSSVFN VSFNPADGTR ASVKYLYELG
HREIALLAGP KQSVSANLRL KSWLETLADY GLSPVSVIHG NWDAQSGYSG ALQMLRETPQ
FSAVLVANDQ MALGVLSAFH QNQLAVPGEK SVIGYDDTYE SSFFYPALTT VSLDLDLQGK
EAVRRMLSAS DNESMRSSSI LPAKLVVRNS TGPQAKEHRD LQKIAEELRL IAQRLAS
|
|---|
| |