Gene YPK_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0975 
Symbol 
ID6089989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1093502 
End bp1094761 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content47% 
IMG OID641596038 
Productmaltoporin 
Protein accessionYP_001719729 
Protein GI170023224 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4580] Maltoporin (phage lambda and maltose receptor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA GTTTACGCAC ACTGTCCGTT GCTTTGGCTG CGGCGTTAGT TTCACCATCT 
GTATTAGCGA TAGAAAAAAT TGATTTCCAC GGCTATATGC GCGCTGGTGT AGGCGTTTCC
AGCGATGGTG GGCTTGCCGA ATGGCAAAAA ACGATGGTGG GCCGTTTGGG TAACGAATCC
GATACCTATG GCGAGATAGG TCTGGGGGCT GAGGTCTATA AAAAAGAAGA TGTCAGTTTC
TACCTTGAGA GCATGGTCAG CATGCTGTCA GACGGCTCTA ATGATAGCGA AACGACCATA
GGTGACGATG CTCAATTCGG CCTGCGCCAA TTAAACTTAC AAATCAAAGG GCTGATCCCC
GGCGATAAAG AGGCGGTGAT CTGGGGTGGG AAACGCTATT ACCAACGCCA CGATTTGCAC
ATTATAGATA CTAAATACTG GAATATTTCG GGCTCCGGCG CAGGGATTGA AAACTATACC
GTAGGTCCAG GCGCAGTGTC TGTGGCCTGG GTCCGTGGTG ACGCAAACGA TGTGGATACC
CGCATTACTG GCGATAGCGA TGTCAATATC AACTATATCG ACGTGCGCTA TGCAGGCTTT
AAGCCATGGG CTGGCTCGTG GACCGAAGTG GGTATCGACT ATGCAATGCC AAACCCAACC
AAACAACAGA AAGAATACGG TGGGTTGTAC GATGCTGATA ACGCGGTGAT GTTAACCGGT
GAAATCAGTC AGGACATGTT TGGTGGCTAT AATAAGCTGG TGCTGCAATA CGCAAATAAA
GGCTTAGCAC AGAACATGAT CTCCCAAGGC GGCGGTTGGT ATGACATGTG GCATAAGACT
GACGAGGCTA AGGGATATCG GGTGATCAAC ACCGGTCTTA TTCCTATTAC CGATAAATTC
TCTTTCAACC ATGTGCTGAC GTGGGGCTCG GCTAACGATA TTACTGAATA CACTGATAAA
ACCAATTTGA TTTCTCTGGT AGGACGTGCG CAATACCAAT TTACACAATA TGTACGTGCT
ATTGGTGAAG TGGGGGGTTT CTATCAAAAA GATACTTATC ACAATGGGTC TAACTACAAA
CAGGGTGGTG AGAAATACAC TATCGCATTA GGTTTGGCCG AGGGTCCTGA TTTTCTGTCT
CGCCCAGAAT TGCGTGTTTT CGCTTCTTAC TTAAATGATT CAGAGAATGG CAAGCCTTTC
GAAGATGGGA CATCTAATGA CACGTGGAAC TTTGGTGTCC AAGTGGAAGC CTGGTGGTAA
 
Protein sequence
MKTSLRTLSV ALAAALVSPS VLAIEKIDFH GYMRAGVGVS SDGGLAEWQK TMVGRLGNES 
DTYGEIGLGA EVYKKEDVSF YLESMVSMLS DGSNDSETTI GDDAQFGLRQ LNLQIKGLIP
GDKEAVIWGG KRYYQRHDLH IIDTKYWNIS GSGAGIENYT VGPGAVSVAW VRGDANDVDT
RITGDSDVNI NYIDVRYAGF KPWAGSWTEV GIDYAMPNPT KQQKEYGGLY DADNAVMLTG
EISQDMFGGY NKLVLQYANK GLAQNMISQG GGWYDMWHKT DEAKGYRVIN TGLIPITDKF
SFNHVLTWGS ANDITEYTDK TNLISLVGRA QYQFTQYVRA IGEVGGFYQK DTYHNGSNYK
QGGEKYTIAL GLAEGPDFLS RPELRVFASY LNDSENGKPF EDGTSNDTWN FGVQVEAWW