Gene YPK_0973 details

Gene Information

• Locus tag: YPK_0973
• ID: 6090757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1090662
• End bp: 1092722
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641596036
• Product: Beta-galactosidase
• Protein accession: YP_001719727
• Protein GI: 170023222
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1874] Beta-galactosidase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.815982
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAGT TTCCGCCCTT AAGCGCGAAA GTTTCTGCGT TATTGCATGG CGCTGACTAT 
AACCCAGAGC AATGGGAAAA TTATCCTGAC ATTATTGATA AAGATATTGC CATGATGAAA 
CAGGCAAAAT GCAATGTCAT GTCAGTGGGA ATATTCAGTT GGGTAAAACT TGAGCCAAGT 
GAAGGAGAAT ATAATTTCTC TTGGTTAGAT GAATTAATTG AAAAACTTTA TGCTGCCGGT 
ATCCATATAT TCCTGGCGAC GCCAAGTGGC GCACGTCCGG CTTGGATGTC GCAGAAATAT 
CCTGAAGTTT TACGTGTCGG GCGTGATCGG GTGCCTGCGC TGCATGGTGG GCGTCATAAC 
CACTGTATGA CCTCGCCGGT ATATCGCCAG AAAGTGCGGC AGATAAACCA GAAGTTAGCA 
GAGCGTTACG CCCATCATCC TGCGGTTATT GGCTGGCACA TCTCTAATGA ATACGGCGGC 
GAATGTCACT GTCATTCCTG TCAGCAAAAA TTCCGCCTCT GGCTTCAGGA TCGTTATCAA 
ACGCTGGATA ACCTTAACGA AGCCTGGTGG AGTGCTTTCT GGAGCCACAC CTACAGCGAT 
TGGTCGCAAA TTGAGTCTCC AGCACCGCAA GGTGAAGTTT CAATTCATGG TCTGAACCTT 
GACTGGCGGC GTTTTAATAC CGCTCAGGTT ACGGAGTTTT GTTCTGAAGA AGCGAAGCCA 
CTAAAGGCGG CAAACCCAGA GTTGCCTGTT ACGACTAACT TTATGGAGTA CTTCTACGAT 
TACGACTACT GGAAGTTGGC GCAGGTGATT GATTTTATCT CCTGGGACAG CTACCCGATG 
TGGCATCGTG AGAAAGATGA AACGCAGCTT GCCTGTTATA CCGCGATGTA TCATGACCTC 
ATGCGTACCC TGAAACAGGG CCGTCCATTT GTCTTAATGG AATCAACGCC GAGCGCGACC 
AACTGGCAAC CTACCAGTAA GTTGAAGAAA CCGGGGATGC ATATCCTCTC TTCTTTACAG 
GCTGTCGCGC ACGGTGCGGA TGCGGTGCAG TATTTCCAAT GGCGTAAGAG CCGTGGCTCC 
GTTGAGAAAT TCCACGGTGC GGTTGTCGAC CATGTTGGCC ACATTGATAC CCGTGTTGGG 
CGGGAGGTGA GCGAACTGGG TCGTATACTC GAGGCCATGT CGCCGGTGAT GGGAAGTAAA 
GTAGACGCTG ATGTTGCCAT CATTTTTGAT TGGGAAAGTC GTTGGGCTAT GGACGACGCC 
GAAGGCCCAC GTAACTGTGG CTTGGAATAT GAGAAAACCG TTGCCGAGCA TTACCGTCCA 
TTCTGGGAAC GGGGCATTGC GGTCGATATC ATTAACGCTG ACTGCGATCT GTCGGGTTAC 
AAGCTGGTCA TTGCACCGAT GCTCTATATG GTTCGCGAAG GGTTTGCTGA AAGGGCGACG 
CGTTTTGTAG AGCAAGGTGG GCAGTTTGTC GCGACCTACT GGAGCGGTAT TGTCAACGAA 
TCTGACCTGT GTCATCTCGG TGGCTTCCCT GGCCCTCTGC GGCCGCTGTT GGGTATCTGG 
TCCGAAGAAA TTGACTGTCT GGCCGATGGC GAGAGCAATC AAGTTCAAGG GCTTGCAGGC 
AATAAAGCCG GTCTACAGGG GCCTTATCAG GCCATCCATC TCTGCGATTT GATTCATCTT 
GAAGGGGCGA CAGCCGTCGC GCGCTATAGA GATGACTTCT ATGCTGACCG TGCGGCGGTG 
ACCGTAAACT TTGTTGGCGA AGGTAAAGCC TGGTATGTCG CTTCACGTAA CGATGCGGCT 
TTCCAGCGTG ATTTCTTCAT GAACATTGCC GAGGAGCTAA ACTTGGCACG TGCGCTAGAC 
ACCCAGTTCC CTTATGGGGT TACCGCTCAC CGTCGTACCG ATGGTGAGAG TGAATTTATC 
GTGGTAGAAA ACTACAGTAA TGACAGCAAA TCGCTGGTGT TACCTGCGGT ATACCGCGAT 
ATGGTCGACC AGCAGCCGGT ACAAGGTAGC CTGACGCTTG CCCCATGGGG AAGCCGAGTG 
CTAACTCGCT ATCTCGAATA A 

 

Protein sequence

MSKFPPLSAK VSALLHGADY NPEQWENYPD IIDKDIAMMK QAKCNVMSVG IFSWVKLEPS 
EGEYNFSWLD ELIEKLYAAG IHIFLATPSG ARPAWMSQKY PEVLRVGRDR VPALHGGRHN 
HCMTSPVYRQ KVRQINQKLA ERYAHHPAVI GWHISNEYGG ECHCHSCQQK FRLWLQDRYQ 
TLDNLNEAWW SAFWSHTYSD WSQIESPAPQ GEVSIHGLNL DWRRFNTAQV TEFCSEEAKP 
LKAANPELPV TTNFMEYFYD YDYWKLAQVI DFISWDSYPM WHREKDETQL ACYTAMYHDL 
MRTLKQGRPF VLMESTPSAT NWQPTSKLKK PGMHILSSLQ AVAHGADAVQ YFQWRKSRGS 
VEKFHGAVVD HVGHIDTRVG REVSELGRIL EAMSPVMGSK VDADVAIIFD WESRWAMDDA 
EGPRNCGLEY EKTVAEHYRP FWERGIAVDI INADCDLSGY KLVIAPMLYM VREGFAERAT 
RFVEQGGQFV ATYWSGIVNE SDLCHLGGFP GPLRPLLGIW SEEIDCLADG ESNQVQGLAG 
NKAGLQGPYQ AIHLCDLIHL EGATAVARYR DDFYADRAAV TVNFVGEGKA WYVASRNDAA 
FQRDFFMNIA EELNLARALD TQFPYGVTAH RRTDGESEFI VVENYSNDSK SLVLPAVYRD 
MVDQQPVQGS LTLAPWGSRV LTRYLE