| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0972 |
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| Symbol | |
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| ID | 6090745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1089409 |
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| End bp | 1090611 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641596035 |
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| Product | arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_001719726 |
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| Protein GI | 170023221 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.396202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCT TTAAACCGGC ATTACTGACT GTTTGTTTAT CGCTAAGCCT CATGGTTGGG
GCTAATGCGG CAGAACCCTT TACCATTGCG CCATTAAAAA ATGTCCCAGC AGATTTTATT
AAAGGGGCTG ATATTTCCAC GTTAGCGGAA GTGGAACGAC AAGGTGGCAA ATTTTTTAAT
GAACAAAATG TTCAACAAGA TGCAATGGCT ATCCTGAAGG CTAACGGCGT GAATTATGTG
CGTCTGCGTT TGTGGGTCGA TCCCAAAGAC AGCGATGGGC AGAGTTACGG CGGTGGCAGT
AACGATTTGG CGACCACTTT GGCGCTGGCT AAACGTGCGA AAGCCCAGGG TTTAAAGGTA
TTGCTTGATT TCCATTACAG CGATTTCTGG ACCGATCCAG GTAAGCAATT TAAGCCGAAG
GCTTGGCAGA AAATGAATTA CGACCAGCTT AAAGTCGCCA TTCATGACTA TACCCGCGAT
ACCATTGCCA CCTTCAAAAA AGAGGGTGTC TTGCCTGATA TGGTGCAAAT CGGCAATGAA
TCCAATGGCG GTCTTCTCTG GCCAGAAGGA AAAAGCTGGG GGGAAGGCGG TGGTGAGTTT
GATCGGCTGG CGGGTTTGCT GAATGCGGCC ATCGGCGGTT TACGTGAGAA CCTCAGTTCC
CCTTCAGATG TGAAAATCAT GCTGCACCTC GCTGAAGGCA CCAAGAATGA CACCTTCCAT
TGGTGGTTTG ATGAAATAAC CAAACGTAAT GTGCCGTTCG ATATTATTGG TCTGTCGATG
TACACCTACT GGGACGGCCC GATTAGCGCC TTGCAAACCA ACATGGATGA TATCAGCCAG
CGTTACCAAA AAGATGTCAT CGTCGTGGAA GCCGCTTATG GCTATACCTT GGAAAATTGT
GATAACGCCG AAAATAGCTT TACCGCTAAA GAAGAGAAAG ATGGGGGTTA TCCCGGAACG
GTTCAAGGAC AAGCGAATTT CATTCATGAT CTGATGCAGA GTGTTATTAA TGTCCCCGAT
GGCAGAGGGA AGGGGATATT TTACTGGGAG CCTACCTGGA TTTCTGTTCC GGGAAATACT
TGGGCAACAC CGGCTGGAAT GAAATATATC AATGATAATT GGAAAGAAGG TAATGCACGT
GAAAATCAGG CGTTATTTGA TTGCCAAGGA AAAGTATTGC CTTCGATGAA AGTTTTTAAT
TAA
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| Protein sequence | MKFFKPALLT VCLSLSLMVG ANAAEPFTIA PLKNVPADFI KGADISTLAE VERQGGKFFN
EQNVQQDAMA ILKANGVNYV RLRLWVDPKD SDGQSYGGGS NDLATTLALA KRAKAQGLKV
LLDFHYSDFW TDPGKQFKPK AWQKMNYDQL KVAIHDYTRD TIATFKKEGV LPDMVQIGNE
SNGGLLWPEG KSWGEGGGEF DRLAGLLNAA IGGLRENLSS PSDVKIMLHL AEGTKNDTFH
WWFDEITKRN VPFDIIGLSM YTYWDGPISA LQTNMDDISQ RYQKDVIVVE AAYGYTLENC
DNAENSFTAK EEKDGGYPGT VQGQANFIHD LMQSVINVPD GRGKGIFYWE PTWISVPGNT
WATPAGMKYI NDNWKEGNAR ENQALFDCQG KVLPSMKVFN
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