| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0966 |
|---|
| Symbol | |
|---|
| ID | 6090727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1082330 |
|---|
| End bp | 1083838 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641596029 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001719720 |
|---|
| Protein GI | 170023215 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTA ACGAGATACT GGCAAAAAAA CCGGACTATC TATTAGAAGC GACGGGACTA
AAAAAATCCT TTGGCGATGT GATCGCGCTA AACAATGCTG AATTCTGTTT AAAACGGGGT
TCTATCCATG CGCTTTGTGG CGGTAACGGT GCCGGTAAAT CAACGTTTCT TGGCCTATTA
ATGGGATTTA TTCAGCCTGA TGATGGAGCG TTTTTCATCA ACGGGCAATA CTGCGAATTC
GACTCACCGG GACAAGCCCT AGCCGCAGGG ATTACCATTG TTCAACAAGA GCTCAGTGGG
GTACAGGATC TGTCTGTGGC CGAAAATATT TATCTGGGTT CTGAGCCAAG GCGCTTTGGT
ATTGTCGATT TTCGTGCGCT TAACCGCCAG GCCGATGTGT TATTACACGA GCTGGGTTTC
GCCATTTCAC CCAAAGCCAA AATGCGCAGC CTGAGCGTAG CAGAGCAACA ACGGGTGGAA
ATTGCCAAAG CGCTGTCACA TACCCATGCC GATATCATCA TTATGGATGA ACCCACCTCC
GCATTAGGTG AAGAGGATGC GCAAAAACTG TTTCAGACCA TAAAAAAACT GGCCTCTCTG
GGAAAAGGGG TTATTTATGT CTCCCACCGC TTGTCAGAAA TATTTCAAAT TGCAGACAGC
TACACGGTAT TTCGAGATGG TTGTTATATT TGTGAAGGAG AGATGAGTCA CATCACTCGC
GAACAACTGA TTGAGCATAT TATTGGTGGC GAGATTGATG GTGAGTTCTC CAAATACAAT
ACTCCAACCA ATGTGCCACT CTTTAAAGCC TCTGGCATAT GTTGGAAATC GAAAGTGAAT
GATGTCAGCC TGACATTACA TTGCGGTGAA ATTTTAGGGA TTTATGGCTT AGTGGGATCG
GGGCGCAGTG AGTTTCTTAA TCTGCTGTTT GGTCTTGAGC GTGCTGATCA CGGGAGCATC
CATATCGGTG ATGAGATATT ACTGAAACAC ACACCAGAAA AAGCAATCAA CGCCGGTATC
GCCTATGTGA CCGAAGATCG TCAAGAGACC GGATTAGTAT TGAACCATTC GGTATCGGAA
AATATTAATA TCTCCTCATT AAACGTCATT AGTCGTATGA GTATCATTAA TGAAAATGAT
ATTCAGCGCC GTGCTGACCA CACGATCCGT ATCTTTAATA TTAAGACACC GAGTCGCCAA
CAACGAGTGG CTAATTTAAG CGGTGGTAAT CAACAAAAGG TGGTGTTAGG CCGCTGGGCA
CTGTTAGACC CTAAAGTTTT ATTATTAGAT GAGCCAACCA GGGGAATTGA CATTGGGGCA
AAAAAAGAAA TTTATCGCTT TATGTCGGAT TTTGCCCTCA AAGGAAAAGG CATTGTTATG
GTCTCCTCCG AGCTTTCTGA AATTATTGGC ATGAGCGACA GAATCTTGGT TTTTAAAAAA
GGGAAAATAG TCGGAGAAAT TATGGGCTCG GAGGCAACAC AGGCCAAATT AATGTCGATG
GCGGTATAA
|
|---|
| Protein sequence | MIRNEILAKK PDYLLEATGL KKSFGDVIAL NNAEFCLKRG SIHALCGGNG AGKSTFLGLL
MGFIQPDDGA FFINGQYCEF DSPGQALAAG ITIVQQELSG VQDLSVAENI YLGSEPRRFG
IVDFRALNRQ ADVLLHELGF AISPKAKMRS LSVAEQQRVE IAKALSHTHA DIIIMDEPTS
ALGEEDAQKL FQTIKKLASL GKGVIYVSHR LSEIFQIADS YTVFRDGCYI CEGEMSHITR
EQLIEHIIGG EIDGEFSKYN TPTNVPLFKA SGICWKSKVN DVSLTLHCGE ILGIYGLVGS
GRSEFLNLLF GLERADHGSI HIGDEILLKH TPEKAINAGI AYVTEDRQET GLVLNHSVSE
NINISSLNVI SRMSIINEND IQRRADHTIR IFNIKTPSRQ QRVANLSGGN QQKVVLGRWA
LLDPKVLLLD EPTRGIDIGA KKEIYRFMSD FALKGKGIVM VSSELSEIIG MSDRILVFKK
GKIVGEIMGS EATQAKLMSM AV
|
|---|
| |