| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0964 |
|---|
| Symbol | |
|---|
| ID | 6090826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1079820 |
|---|
| End bp | 1080821 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641596027 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001719718 |
|---|
| Protein GI | 170023213 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CAATGCTACA AACTCTGCTT GCTGCAACGC TGATACTTTC CTTTGCGGCA
TCAGTGCAAG CAGCCCCAGT AAAAATTGCT ATTTTGATGT ATGGCATGAA AGCTGAATTT
GTTCAGCTAA TGGAAAAGTC AGCCAAAGAA CATCCTGCGG TAACACAGGG GTTAACTACG
TTGACTCTTT TCGATGGCCG CTATGATCCG TTAGTCCAGA ATAACCAAGC CGAAACTGCA
ATACGTACCC GTTATGATGC CATTATTATT GTTCCGATAG ATTTTGAAGC CAACGTAGAT
GTGGTCACGA TGGCGAATAA AGCCAATATT CCGGTGATTG TCGCCAATGC CCGCTTGAAT
ACAGATAAAG CGACCAGTGG AATCTTCTCT GATGATGTTC AAGGGGGTTA TCTGGAAGCC
AAAGCGGTGC TGGATAAAAT GCAGTGCCAG GGCAATGTGG TCGTTATTGA AGGGCCAATC
GGGCAATCCG CACAGATCCA GCGTGGCCAG GGCAACGATA AAGCGATTGC TGAATGTGGG
CCGGGGAAAA TCAACGTACT GGAACGTAAA ACCGCCAACT GGTCACGTGC CGAAGCGATG
CCGTTGATGG AGAACTGGCT ACAAAAACAT CGTGGCAAGA TTAATGGTGT GATCGGGCAG
AATGACGAAA TGGCGTTGGG TGCCATTGAA GCGATCAAGA GCGCCGGCCT GAATGTCCAA
GATTTTGCCA TTGCCGGTAT CGATGGTGTC TCTGATGCGA TCCGGGCGGT TAAACAAGGT
GAAATGATGT CTATCCTGCA AGATGGCCAG GCTCAAATAC AAGGGGCTAT TGATATCGCT
ATGCGTTCGG TACAAGGAGA GCGTTACCAG CCGATGTCAA CGATCTGGCA GCAATATCAG
GGAAAAATGG ATTGGCAACA AGGGACGGCA AAAATGTATG AAGTGCCTTG GACTGAAGTA
ACGCCACAAA ATGCGGACGA GCTGCTAAAG ATGCGTCAGT AA
|
|---|
| Protein sequence | MKKTMLQTLL AATLILSFAA SVQAAPVKIA ILMYGMKAEF VQLMEKSAKE HPAVTQGLTT
LTLFDGRYDP LVQNNQAETA IRTRYDAIII VPIDFEANVD VVTMANKANI PVIVANARLN
TDKATSGIFS DDVQGGYLEA KAVLDKMQCQ GNVVVIEGPI GQSAQIQRGQ GNDKAIAECG
PGKINVLERK TANWSRAEAM PLMENWLQKH RGKINGVIGQ NDEMALGAIE AIKSAGLNVQ
DFAIAGIDGV SDAIRAVKQG EMMSILQDGQ AQIQGAIDIA MRSVQGERYQ PMSTIWQQYQ
GKMDWQQGTA KMYEVPWTEV TPQNADELLK MRQ
|
|---|
| |