| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0921 |
|---|
| Symbol | |
|---|
| ID | 6090147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1039211 |
|---|
| End bp | 1039927 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641595983 |
|---|
| Product | thiol:disulfide interchange protein DsbC |
|---|
| Protein accession | YP_001719675 |
|---|
| Protein GI | 170023170 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1651] Protein-disulfide isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GTTTATTGCT GCTGCCAATG TTAATGGCTG CATTATCGGG GGTTGCTAAT
GCAGATGATT CTGCTATTCA GCAAACCTTA AAAAAATTAG ATATCCAACA AGCTGATATC
CAGCCGTCAC CTATCCCAGG CATTAGTACG GTGATGACCG AAAGCGGCGT GCTCTATATC
TCAGCAGATG GTAAACATCT GCTGCAAGGG CCGCTGTATG ACGTGAGTGG CGATCAGCCC
ATCAATGTGA CCAATCAGGC GTTGCTGAAA AAACTGGAAG CATTGAGCAG TGAAATGATT
GTGTATAAAG CACCCGAGGA AAAACACGTC ATTACGGTGT TCACAGACAT TACCTGCGGC
TACTGCCGTA AATTGCACGA ACAAATGAAA GATTATAATG CGCTTGGCAT CACTGTTCGC
TATCTGGCCT TCCCGCGTCA GGGGTTAAGC TCTCAGGCGG AAAAAGACAT GCGTTCTATC
TGGTGTATGG CTGATCGTAA TAAAGCCTTT GATGATGCCA TGAAAAATAA TGATATCTCC
CCAGCAACCT GCAAAACCGA TATCAGCAAG CATTATCAGC TAGGTGTGCA ATTTGGTATC
CAGGGTACGC CAGCTATTGT GCTGCAAAAT GGCACTATTG TCCCAGGCTA TCAGGGACCG
AAAGAAATGC TACAGATGCT TAATGCGCAT CAGGCTTCAC TAAAAGCGGG TGGTTGA
|
|---|
| Protein sequence | MKKSLLLLPM LMAALSGVAN ADDSAIQQTL KKLDIQQADI QPSPIPGIST VMTESGVLYI
SADGKHLLQG PLYDVSGDQP INVTNQALLK KLEALSSEMI VYKAPEEKHV ITVFTDITCG
YCRKLHEQMK DYNALGITVR YLAFPRQGLS SQAEKDMRSI WCMADRNKAF DDAMKNNDIS
PATCKTDISK HYQLGVQFGI QGTPAIVLQN GTIVPGYQGP KEMLQMLNAH QASLKAGG
|
|---|
| |