| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0897 |
|---|
| Symbol | |
|---|
| ID | 6089933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1018758 |
|---|
| End bp | 1020545 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641595959 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001719651 |
|---|
| Protein GI | 170023146 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5484] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.672051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC ACTCTCAAAC CATTATCGGT GTGGCGCGTT CACTTTATTT ACATCGGTGG
ACACCGAAAG AAATCGCCAA TGAATTAAAT CTGCCTAATG CGCGGATTAT TTACTATTGG
GCACAAAAAT GGCATTGGGC TGATATGCTC AGTCATGAAA GTATTGAGGA GGCAATCAAC
CGCCGTATAT TGGTGCTGGC CAATCGCGAT AATAAAAACG AGCTGGAATT AAAAGAGATA
GACAGCTTAA TCGCCCAGCA CTGCAAATTA ATGGCGCAGA AGAGTAAACA CACGGAAAAA
CTGGCGGCGA TTAAAGCGCA GACACAAGGC AGCTATGCCA GCGGTGAAGA AGCTGCCGCG
CGGGATGATA ATGGCGGCGG GAAACGTAAA TACCGCAAAA ATGATATTTC AGGCATTCAA
CAGGAAGAAC TGGAACTGTT TGCCGGGGAA ACGCTGTTTT TCTATCAGCA ATACCTGCGG
GCCAATAAAC ACCACGCTAT CCGCAATATC CTGAAAAGCC GCCAGATTGG GGCGACGTGG
TATTTCGCCT TTGAAGCACT GGAAGACGCG ATTATGAGCG GCGATCCGCA AATATTCCTG
TCTGCCTCCC GTGCGCAGGC CGAAGTATTC CGCTCGTATA TCGTTAATAT CGCGCAGCAG
TTCTTTGGGG TAACACTGAC CGGCAACCCA ATACGCCTCA GTAACGGCGC GGAGCTGCGT
TTCCTGTCTA CCAACAAGAA CACCGCCCAA TCCTACAGCG GCCACCTGTA TTGCGATGAA
TATTTGTGGG TACCGAATTT CGCCAAATTA AATGAAGTGG CCAGTGCCAT GGCCACCCAT
GATAAATGGC GCACCACCTA TTTCTCCACA CCCAGCGCCA AGACCCATCA GGGTTATCCG
TTCTGGACGG GTGAAGAGTG GAAGCAAGGC GACAAACAGC GCAGCAAAAT CACCTTCCCT
GAGTTCGACG AGTACCGCGA CGGCGGGCGG CTCTGCCCCG ATGGCCAGTG GCGCTATGTC
ATTACCCTAG AGGACGCGAT AGACGGCGGC TTTAATCTGG CCGATATCGA GCGTCTGCGC
AATAAGTACA ACCGCGACAC CTTTAACATG CTCTATATGT GTGTGTTTGT GGACAGCGGC
GACAGCGTAT TTAAATTTCA TATGCTGGAA AAATGCGGCG TCGATATCGA GATGTGGCAA
GACCATGATT TCAGTGCGCC ACGGCCATTC GGCAACCGTG AGGTGTGGGG CGGCTTTGAC
CCGGCCCGCA GCGGTGACAC CTCAACCTTT GCCATTATTG CCCCGCCGCA GTTTGAGGGG
GAGCGCTTCC GGGTGCTGGT CACGTTCTAC TGGCAGGGGC TGAACTTTAA CTATCAGGCC
AACCAGATAA AAGAACTGTT TCAGCGCTAC AACATGACCT ACATCGGCGT AGATATCACC
GGGATCGGCA ACGGTGTGTT TGAACTGGTA CAGAACTTTG CCATGCGCCA AGCGGTGGCC
ATCCACTACG GGCTGGAAAG TAAGAACCGG CTGGTCATGA AAATGATAGA TGTGATCGAA
AGCCAGCGCA TTGAATGGGA CGCCGAAGCC AAAGAGATCC CGGCGTCATT TCTGGCCATC
CGTCGCACCA GTACCGCCAA GGGCGGCGGC ATGACCTTTG TTGCAGACCG TACCAAAGAA
ACTGGCCACG CCGATGTATT TTTCGCCATT GCCCACGCAA TAGATAATGA ACCGCTCAAC
TTTGAGCACC AACGTAAATC CACATGGAAG ACGAGCAAAG CCGCATGA
|
|---|
| Protein sequence | MAKHSQTIIG VARSLYLHRW TPKEIANELN LPNARIIYYW AQKWHWADML SHESIEEAIN
RRILVLANRD NKNELELKEI DSLIAQHCKL MAQKSKHTEK LAAIKAQTQG SYASGEEAAA
RDDNGGGKRK YRKNDISGIQ QEELELFAGE TLFFYQQYLR ANKHHAIRNI LKSRQIGATW
YFAFEALEDA IMSGDPQIFL SASRAQAEVF RSYIVNIAQQ FFGVTLTGNP IRLSNGAELR
FLSTNKNTAQ SYSGHLYCDE YLWVPNFAKL NEVASAMATH DKWRTTYFST PSAKTHQGYP
FWTGEEWKQG DKQRSKITFP EFDEYRDGGR LCPDGQWRYV ITLEDAIDGG FNLADIERLR
NKYNRDTFNM LYMCVFVDSG DSVFKFHMLE KCGVDIEMWQ DHDFSAPRPF GNREVWGGFD
PARSGDTSTF AIIAPPQFEG ERFRVLVTFY WQGLNFNYQA NQIKELFQRY NMTYIGVDIT
GIGNGVFELV QNFAMRQAVA IHYGLESKNR LVMKMIDVIE SQRIEWDAEA KEIPASFLAI
RRTSTAKGGG MTFVADRTKE TGHADVFFAI AHAIDNEPLN FEHQRKSTWK TSKAA
|
|---|
| |