Gene YPK_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0879 
Symbol 
ID6089832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1005158 
End bp1006591 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content51% 
IMG OID641595941 
Productsensory histidine kinase CreC 
Protein accessionYP_001719633 
Protein GI170023128 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG GTGTACGGTT GCTACTTGGC TATTTCCTGA TTGTGGCTAT CGCTGGCTAC 
TTTGTTATTC GTATTTTTTT GCAGGAAGTC AAACCCGGAG TGCGGCGCGC GACTGAAGGC
ACCTTAGTGG ATACGGCGAC CTTACTGGCG CAATTCGCCC GGCAGGATAT ATTGCAGAAC
AAAGTGGCCG ACGGGCAATT GGCGCAAGCA TTTTCTTCCC TTAATCTGCG GCCTATTGGT
GCCAATATTG AAGGTATCCG TAAGGATCGC AATGAATATA GGGTCTATCT GACCGATACT
GATGGGCAGG TGATTTTTGA TTCATCAGGC CGAGCATTAG GGCAAGACTA TTCACGTTGG
AATGATGTCT GGTTGACGCT ACGTGGTGAG TATGGCGCCC GCAGTAGCCG CACTGACCCC
GACGATGCAG AAAGTTCGGT AATGTATGTG GCGGCACCGG TCATCGTCGA AAATCGTATT
GTTGGTGTAC TGAGTATAGG TAAGCCGAAT CTCTCCATGG TGCCGGTGAT CAAACGCAGT
GAACGCAAGA TCCTGTTTGC AGGTGGGCTG CTGTTAGGCA TTGCATTGCT GATTGGGTTG
GGGTTTGTGT GGTGGATTAA CCGGGCGATC GGCAAGTTGG TGGACTACGC AGAACGGGTT
GCCGAGGGGC AGGCGGTGGC TCTGCCAGCG ATGGGGAGCA GTGAATTGAA TGATTTGGCA
CTGGCGCTGG AAAGCATGCG TCTCAAATTG GATGGCAAAG CCTATATCGA ACAATATGTT
CACACGCTGA CTCATGAATT GAAAAGCCCG CTGGCCGCTA TCTCCGGGGC GGCTGAGTTA
CTGCGAGAGT CTCCACCGCC AGAGACCGCA CAACGTTTTC TGATCAATAT TGAGCAGCAA
AGTGCACGAA TCCAGCAACT GGTAGATAAA ATGCTGGTGC AAGCACGGCT GGAGAGCCGG
GTAGATCTAC AACTCTCCCC CTTGGAAATC AGCCATATAC TCAAGCAGAG CTTTAGCGCC
AAAGAAGCTC AGGCGGTTAG CCGAGGGGTC ACTCTGCGGC TAAAATCTGT AGATAACGCG
ATGTTGATCG GCGATGGGCT GTTGCTCAGC CAGGCCTTAA CTAATCTGAT TGATAATGCT
CTGGATTTCA CACCTGCGGG AGGGGAGATT AACGTGAGTG GTGAACGGCA AGATGATACC
TATCTGATCA CGGTTGAAGA CAGTGGCTGT GGTATTCCTG ATTATGCCCA AGAGAAGATT
TTTGACCGTT TTTATTCGTT ACCACGGGCT AATAGCCCCA AAAGTACAGG GTTAGGGCTA
AATTTCGTAC GTGAAGTTGC TGCTATTCAT CAGGGAAGTA TTTGTTTGGA GAACCGCCTA
CCACAAGGGG TTAGCGCGCG TTTGACATTA CCGCTGTCAA GGGTTCACCG CTAA
 
Protein sequence
MKIGVRLLLG YFLIVAIAGY FVIRIFLQEV KPGVRRATEG TLVDTATLLA QFARQDILQN 
KVADGQLAQA FSSLNLRPIG ANIEGIRKDR NEYRVYLTDT DGQVIFDSSG RALGQDYSRW
NDVWLTLRGE YGARSSRTDP DDAESSVMYV AAPVIVENRI VGVLSIGKPN LSMVPVIKRS
ERKILFAGGL LLGIALLIGL GFVWWINRAI GKLVDYAERV AEGQAVALPA MGSSELNDLA
LALESMRLKL DGKAYIEQYV HTLTHELKSP LAAISGAAEL LRESPPPETA QRFLINIEQQ
SARIQQLVDK MLVQARLESR VDLQLSPLEI SHILKQSFSA KEAQAVSRGV TLRLKSVDNA
MLIGDGLLLS QALTNLIDNA LDFTPAGGEI NVSGERQDDT YLITVEDSGC GIPDYAQEKI
FDRFYSLPRA NSPKSTGLGL NFVREVAAIH QGSICLENRL PQGVSARLTL PLSRVHR