| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0873 |
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| Symbol | |
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| ID | 6090055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1000891 |
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| End bp | 1001592 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641595935 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001719627 |
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| Protein GI | 170023122 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAATA AATCAGGGAC ACAACCTCTC TTTGCAACAC CATCCGTACC CGCCGCACAA
ACGGCCACCC CAACCCCGGT TTACCCGTGG GCTGAAGAGC TGGCGAACAG CCTCAGCCAT
GGTATCGGTG TGGTGTTCGG TATTGTGGGG CTGGTATTGC TACTGGTTCA GGCGGTGAAC
AGTGGTGCCG ATACCAAAGC GCTCACTAGC TATAGTTTGT ACGGTAGCAG TATCATTTTG
TTGTTTTTGG CCTCTACGCT GTATCACGCC ATTCCACATC GTAGGGCGAA GCTCTGGCTG
CAAAAATTTG ATCACTGCGC TATCTACATC TTGATTGCCG GGACTTATAC GCCGTTCTTA
TTAGTAGGGC TAGATTCGCC TCTGGCCAGA GGTTTGATGG CGGTTATTTG GGGGCTGGCA
CTCATCGGTG TGATCTTTAA GTTGGCGTTT GCTCATCGTT TTGAAGTGTT GTCACTGGTG
ACCTATCTGA CCATGGGGTG GTTATCGCTG ATTGTCATTT ATCAGCTCGC GGTCAAGCTT
GAGATCGGGG GGTTGGCACT GCTGGCGATA GGGGGCTTGT TATATACGGT TGGGGTGATC
TTCTATGCAT CGAAACGTAT CCGTTTTGGT CATGCTATCT GGCACGGTTT TGTGTTAGGC
GGCAGTGTCT GCCATTTTAT GGCGATCTAT CTATATGTTT AA
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| Protein sequence | MKNKSGTQPL FATPSVPAAQ TATPTPVYPW AEELANSLSH GIGVVFGIVG LVLLLVQAVN
SGADTKALTS YSLYGSSIIL LFLASTLYHA IPHRRAKLWL QKFDHCAIYI LIAGTYTPFL
LVGLDSPLAR GLMAVIWGLA LIGVIFKLAF AHRFEVLSLV TYLTMGWLSL IVIYQLAVKL
EIGGLALLAI GGLLYTVGVI FYASKRIRFG HAIWHGFVLG GSVCHFMAIY LYV
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