| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0859 |
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| Symbol | |
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| ID | 6087484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 982274 |
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| End bp | 983515 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641595921 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001719613 |
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| Protein GI | 170023108 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.359176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG TATCACTGGA GAAAGACAGA ATTAAGTTTC TGTTAGTGGA AGGGGTGCAC
CAGAGCGCGG TTGATAACCT GCGTGCAGCC GGATATAGCA ATATTGAATA CCATAAAGGT
GCCTTAGACG CCGAATCACT GAAGGCATCC ATTCGTGATG CTCACTTTAT CGGAATTAGA
TCGCGCACTC ATCTTTCCGA AGACGTTTTT GCGGCAGCAG AAAAATTGGT TGCTGTGGGT
TGTTTCTGTA TCGGTACTAA CCAGGTTGAT TTAAAAGCGG CGACCAAACG TGGTGTGCCA
GTATTCAATG CGCCTTTCTC CAATACCCGT TCGGTAGCCG AAATGGTACT GGGTGAGTTA
CTGCTGATGT TCCGAGGCAT TCCGTCTGCT AACGCGAAAG CGCACCGTGG CGAGTGGAAC
AAGTTGGCGG TAGGTTCCTT TGAGGCCAGA GGTAAGAAAC TGGGGATTAT CGGTTACGGT
CATATCGGTA CTCAACTGGG GATTCTGGCT GAAAGTATCG GTATGAAAGT CTTCTTTTAC
GACATCGAAA ATAAACTGTC GTTAGGGAAT GCGCAGCAAG TTCGCCAACT GTCAGATTTA
CTGAATATGA GTGATGTGGT CAGCCTGCAT GTACCGGAAA ACCACACTAC CAAGAATATG
ATTGGCGCTG AGCAATTGGC ACAGATGAAG CCGGGTGCGC TGTTGATTAA TGCCTCTCGC
GGCACCGTGG TCGATATTCC GGCCCTGTGC GATGCGCTGT CCAGCAATCA CTTGTCAGGT
GCGGCAATTG ACGTCTTCCC TGAAGAGCCT GCGACCAATA AAGACCCGTT CAATTCACCA
CTGTGTGAAT TTGATAATGT GTTACTGACC CCGCATATTG GCGGTTCTAC TCAGGAGGCG
CAGGAGAATA TCGGTGATGA AGTCGCGGGT AAGCTGGCGA AGTATTCCGA TAATGGCTCA
ACGCTATCTG CGGTGAATTT CCCCGAAGTT TCTCTGCCAG CACATGGTGA TAATACCCGT
CGCCTGTTGC ATATTCATGA AAACCGGCCA GGCATTTTGA CCAGCATTAA CACCATTTTT
GCTGAGCAGA ATGTCAATAT CGCGGCACAG TATCTACAAA CCAGCGCTGA TATTGGTTAT
GTCGTGATTG ATGTTGAAAC CGATGATGCA GATAATGCGG AAAAAGCCTT GCAGGCGATG
AAGGCCATTC CAGGGACGAT CCGCGCTCGC TTATTGTACT AA
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| Protein sequence | MAKVSLEKDR IKFLLVEGVH QSAVDNLRAA GYSNIEYHKG ALDAESLKAS IRDAHFIGIR
SRTHLSEDVF AAAEKLVAVG CFCIGTNQVD LKAATKRGVP VFNAPFSNTR SVAEMVLGEL
LLMFRGIPSA NAKAHRGEWN KLAVGSFEAR GKKLGIIGYG HIGTQLGILA ESIGMKVFFY
DIENKLSLGN AQQVRQLSDL LNMSDVVSLH VPENHTTKNM IGAEQLAQMK PGALLINASR
GTVVDIPALC DALSSNHLSG AAIDVFPEEP ATNKDPFNSP LCEFDNVLLT PHIGGSTQEA
QENIGDEVAG KLAKYSDNGS TLSAVNFPEV SLPAHGDNTR RLLHIHENRP GILTSINTIF
AEQNVNIAAQ YLQTSADIGY VVIDVETDDA DNAEKALQAM KAIPGTIRAR LLY
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