Gene YPK_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0858 
Symbol 
ID6087717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp981311 
End bp981967 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID641595920 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001719612 
Protein GI170023107 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGG ATGAACTTAA AAAAGCGGTG GGCTGGGCAG CATTAGATTA CGTTAAACCC 
GGTACGATTG TGGGTGTCGG CACGGGTTCA ACTGCGGCGC ATTTTATTGA CGCGCTAGGC 
TCGATTAAAC ATCAGATCGA AGGGGCTGTT TCCAGTTCTG ATGCTTCAAC CGCCAAGCTG 
AAAAGCTATG GTATCCCAGT ATTTGATTGT AATGACGTTG ATGTATTGGA TATCTATGTT 
GATGGTGCTG ACGAAATTAA CGGCCAAATG CAGATGATTA AAGGCGGTGG CGCAGCACTG 
ACCCGAGAGA AGATTATTGC GGCTATCGCC CGGAAGTTTA TCTGTATTGC TGATGAATCC 
AAACAAGTTG GTGTGCTGGG TAAATTCCCC CTGCCAGTCG AAGTGATCCC GATGGCCCGC 
TCTTATGTGG CGCGTGAGCT GATTAAATTG GGTGGTTTGC CTGAATACCG TCAGAATGTC 
CTGACCGATA ACGGTAACGT TATTCTGGAT GTCCACAACT TGAGTATTTT GGATGCTATC 
GCTTTAGAGA ACCAAATTAA TGGCATTGCC GGTGTCGTAA CGGTGGGGCT ATTTGCGAAT 
CGCGGTGCTG ATGTGGCCCT GATTGGTACG GCCAATGGCG TTAAAGTGAT TGGCTAA
 
Protein sequence
MTQDELKKAV GWAALDYVKP GTIVGVGTGS TAAHFIDALG SIKHQIEGAV SSSDASTAKL 
KSYGIPVFDC NDVDVLDIYV DGADEINGQM QMIKGGGAAL TREKIIAAIA RKFICIADES 
KQVGVLGKFP LPVEVIPMAR SYVARELIKL GGLPEYRQNV LTDNGNVILD VHNLSILDAI 
ALENQINGIA GVVTVGLFAN RGADVALIGT ANGVKVIG