Gene YPK_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0855 
Symbol 
ID6090936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp978464 
End bp979081 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content51% 
IMG OID641595917 
Productarginine exporter protein 
Protein accessionYP_001719609 
Protein GI170023104 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.984565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCGG TCTATTTGCA CGGTTTTATC CTTAGCGCTG CGATGATTTT GCCGCTTGGG 
CCACAAAATG TTTTTGTGAT GAATCAGGGG ATCAAGCGTC AGCATCATTT GATGAGCGCA 
TCCCTTTGTG CTCTCAGTGA CATTATCTTG ATTTGCGCAG GGATTTTTGG CGGCAGTGCT 
TTATTGAGCC GTTCGCCTTT ACTGCTGGCA TTGGTGACCT GGGGGGGCGT GGCTTTCCTG 
ATGTGGTACG GTTGGGGGGC ATTGATGGCG GCGTGGCGGG GGGATGGTGT TGCTTCGTCA 
GCAACGAGTG TCACGCAGGG GCGCTGGCGC ATATTGGTCA CCTTATTGGC CGTTACCTGG 
CTTAATCCTC ACGTTTATCT GGATACCTTT GTTGTTTTGG GCAGTTTGGG TGGGCAGCTA 
TTACCTGATA TACGCCCTTG GTTTGCTTTA GGGGCGGTCA CGGCCTCTAT TGTTTGGTTT 
TTTGCCTTAG CATTTCTAGC AGCATGGTTA TCACCGTGGT TAAATCGCCC AGTGGCACAA 
CGAATCATTA ACCTATTTGT TGGCGGGGTA ATGGGGTTTA TTGCTTTCCA ATTGGCACGA 
CAGGGATTCG GCCTATGA
 
Protein sequence
MLAVYLHGFI LSAAMILPLG PQNVFVMNQG IKRQHHLMSA SLCALSDIIL ICAGIFGGSA 
LLSRSPLLLA LVTWGGVAFL MWYGWGALMA AWRGDGVASS ATSVTQGRWR ILVTLLAVTW 
LNPHVYLDTF VVLGSLGGQL LPDIRPWFAL GAVTASIVWF FALAFLAAWL SPWLNRPVAQ 
RIINLFVGGV MGFIAFQLAR QGFGL