Gene YPK_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0852 
Symbolpgk 
ID6089115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp974549 
End bp975712 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content51% 
IMG OID641595914 
Productphosphoglycerate kinase 
Protein accessionYP_001719606 
Protein GI170023101 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00852625 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAA TTAAGATGAC CGATCTGGAT CTGGCTGGCA AACGTGTTTT GATCCGTGCG 
GACCTCAATG TTCCGGTAAA AGAAGGCAAA GTGACTTCTG ATGCGCGTAT CCGTGCCTCT
CTGCCAACTA TCGAAGCGGC ATTGAAGCAA GGCGCTAAAG TAATGGTTAC CTCTCACTTG
GGTCGCCCGA CCGAAGGCGA GTACAACGAA GAGTTCTCCT TACTGCCCGT CGTTAACTAC
CTGAAAGAGA AGTTATCTTC TCCGGTACGT CTGGCGAAGG ACTATCTGGA CGGCGTTGAA
ATTGCAGCTG GCGAGTTGGT TGTTCTGGAA AACGTTCGCT TTAACAAAGG CGAGAAAAAA
GACGACGAAG CCCTGTCCAA GAAATATGCC GCACTGTGCG ATGTTTATGT AATGGATGCT
TTTGGTACCG CTCACCGCGC TCAGGCATCG ACTCACGGTG TGGGTAAATT TGCCCCTATC
GCTTGCGCCG GCCCGCTGTT GTCAGCAGAG CTGGAAGCAT TGGGTAAAGC GCTGGGTAAC
CCAGCGCGTC CAATGGTTGC TATCGTTGGT GGTTCTAAAG TTTCAACTAA ACTGACCGTG
CTGGGCGCGT TGTCTAAAAT CGCGGATAAA CTGATTGTTG GCGGTGGTAT CGCTAATACC
TTCGTTGCGG CTCAAGGCCA CAATGTCGGT AAATCTCTGT ACGAAGCTGA TCTGATCCCA
GAAGCGAAAA GACTGCTAGA GACCTGTGAT ATCCCTGTTC CTACTGATGT TCGTGTTGCC
ACTGAGTTCT CTGAAACGGC AGCCGCGACG CTGAAACCCG CGAACGAAAT TAAAGATGAC
GAACAAATTT TGGATCTGGG CGACGAATCT GCGGAGCGTC TGGCTGAGAT CCTGAAAAAT
GCCAAAACCA TTCTGTGGAA TGGTCCGGTT GGTGTGTTCG AGTTCCCTAA CTTCCGTAAA
GGGACCGAGA TCGTGGCTCG CGCCATTGCA GAAAGCGAAG CATTTTCTAT CGCAGGCGGT
GGTGATACTT TGGCAGCAAT CGATCTCTTC GGTATTGCTG ACCAAATCTC CTATATTTCT
ACTGGCGGTG GTGCTTTCCT GGAGTTCGTC GAAGGGAAAA AACTGCCTGC CGTAGTGATG
CTGGAAGAGC GCGCTAAGCA GTAA
 
Protein sequence
MSVIKMTDLD LAGKRVLIRA DLNVPVKEGK VTSDARIRAS LPTIEAALKQ GAKVMVTSHL 
GRPTEGEYNE EFSLLPVVNY LKEKLSSPVR LAKDYLDGVE IAAGELVVLE NVRFNKGEKK
DDEALSKKYA ALCDVYVMDA FGTAHRAQAS THGVGKFAPI ACAGPLLSAE LEALGKALGN
PARPMVAIVG GSKVSTKLTV LGALSKIADK LIVGGGIANT FVAAQGHNVG KSLYEADLIP
EAKRLLETCD IPVPTDVRVA TEFSETAAAT LKPANEIKDD EQILDLGDES AERLAEILKN
AKTILWNGPV GVFEFPNFRK GTEIVARAIA ESEAFSIAGG GDTLAAIDLF GIADQISYIS
TGGGAFLEFV EGKKLPAVVM LEERAKQ