Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0852 |
Symbol | pgk |
ID | 6089115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 974549 |
End bp | 975712 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595914 |
Product | phosphoglycerate kinase |
Protein accession | YP_001719606 |
Protein GI | 170023101 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00852625 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTAA TTAAGATGAC CGATCTGGAT CTGGCTGGCA AACGTGTTTT GATCCGTGCG GACCTCAATG TTCCGGTAAA AGAAGGCAAA GTGACTTCTG ATGCGCGTAT CCGTGCCTCT CTGCCAACTA TCGAAGCGGC ATTGAAGCAA GGCGCTAAAG TAATGGTTAC CTCTCACTTG GGTCGCCCGA CCGAAGGCGA GTACAACGAA GAGTTCTCCT TACTGCCCGT CGTTAACTAC CTGAAAGAGA AGTTATCTTC TCCGGTACGT CTGGCGAAGG ACTATCTGGA CGGCGTTGAA ATTGCAGCTG GCGAGTTGGT TGTTCTGGAA AACGTTCGCT TTAACAAAGG CGAGAAAAAA GACGACGAAG CCCTGTCCAA GAAATATGCC GCACTGTGCG ATGTTTATGT AATGGATGCT TTTGGTACCG CTCACCGCGC TCAGGCATCG ACTCACGGTG TGGGTAAATT TGCCCCTATC GCTTGCGCCG GCCCGCTGTT GTCAGCAGAG CTGGAAGCAT TGGGTAAAGC GCTGGGTAAC CCAGCGCGTC CAATGGTTGC TATCGTTGGT GGTTCTAAAG TTTCAACTAA ACTGACCGTG CTGGGCGCGT TGTCTAAAAT CGCGGATAAA CTGATTGTTG GCGGTGGTAT CGCTAATACC TTCGTTGCGG CTCAAGGCCA CAATGTCGGT AAATCTCTGT ACGAAGCTGA TCTGATCCCA GAAGCGAAAA GACTGCTAGA GACCTGTGAT ATCCCTGTTC CTACTGATGT TCGTGTTGCC ACTGAGTTCT CTGAAACGGC AGCCGCGACG CTGAAACCCG CGAACGAAAT TAAAGATGAC GAACAAATTT TGGATCTGGG CGACGAATCT GCGGAGCGTC TGGCTGAGAT CCTGAAAAAT GCCAAAACCA TTCTGTGGAA TGGTCCGGTT GGTGTGTTCG AGTTCCCTAA CTTCCGTAAA GGGACCGAGA TCGTGGCTCG CGCCATTGCA GAAAGCGAAG CATTTTCTAT CGCAGGCGGT GGTGATACTT TGGCAGCAAT CGATCTCTTC GGTATTGCTG ACCAAATCTC CTATATTTCT ACTGGCGGTG GTGCTTTCCT GGAGTTCGTC GAAGGGAAAA AACTGCCTGC CGTAGTGATG CTGGAAGAGC GCGCTAAGCA GTAA
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Protein sequence | MSVIKMTDLD LAGKRVLIRA DLNVPVKEGK VTSDARIRAS LPTIEAALKQ GAKVMVTSHL GRPTEGEYNE EFSLLPVVNY LKEKLSSPVR LAKDYLDGVE IAAGELVVLE NVRFNKGEKK DDEALSKKYA ALCDVYVMDA FGTAHRAQAS THGVGKFAPI ACAGPLLSAE LEALGKALGN PARPMVAIVG GSKVSTKLTV LGALSKIADK LIVGGGIANT FVAAQGHNVG KSLYEADLIP EAKRLLETCD IPVPTDVRVA TEFSETAAAT LKPANEIKDD EQILDLGDES AERLAEILKN AKTILWNGPV GVFEFPNFRK GTEIVARAIA ESEAFSIAGG GDTLAAIDLF GIADQISYIS TGGGAFLEFV EGKKLPAVVM LEERAKQ
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