| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0845 |
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| Symbol | |
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| ID | 6090342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 966132 |
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| End bp | 968111 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641595907 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001719599 |
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| Protein GI | 170023094 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATG ATAACTTGAT TAGCCGTCCG TTAACTGCGG GCGCACATGT TTCTTTACGC
TCCATGCAGG AGGTAGCCAT GAATGATCGG AATGCCAGCA AGATGCTGAG CACGTATAAC
GTCGCCTACT GGGGTGGCAA CTATTATGAC GTCAATGAAT TAGGTCATAT CAGTGTTTGC
CCTGATCCGG ATATTCGTGA GGCGCGTGTC GATCTGGCAC AACTGGTTAA GAAGATGCAG
CTCGAACAAG GGCAACGTTT GCCTGCGCTG TTCTGCTTCC CACAAATTTT ACAGCATCGT
CTGCGTTCAA TTAACGCGGC GTTTAAACGT GCGCGTGAGT CTTTCGGCTA TGAAGGCGGC
TACTTCCTGG TTTACCCCAT TAAAGTAAAC CAACACCGTC GAGTGATTGA GTCTTTGGTC
AATTCCGGCG AACCGTTAGG GCTGGAAGCG GGTTCTAAAG CTGAGATGAT GGCGGTGCTG
GCCCATGCTG GCATGACTCG TTCGGTTATC GTGTGTAACG GTTATAAAGA CCGTGAATAC
ATTCGTTTGG CTTTGATCGG TGAAAAACTG GGCCATAAGG TGTATCTGGT CATCGAAAAG
ATGTCAGAAA TCAAAATGGT CCTGGAAGAA GCCGAGCGGC TGAATGTGGT TCCACGTTTG
GGGGTTCGCG CCCGCCTGGC ATCACAAGGT TCCGGTAAAT GGCAGGCCAG TGGGGGTGAG
AAGTCCAAAT TTGGTTTGTC TGCAACGCAG GTATTACAAC TGGTTGATAT GCTGCGTGAG
GCGAATAGCC TGGAAAGTTT GCAATTACTG CATTTCCACT TAGGTTCTCA ACTCTCCAAC
ATCCGTGATA TCTCCACCGG CGTGCGTGAA TCTGCTCGTT TCTATGTGGA GTTACACAAG
CTGGGCGTTA ATATCCAGTG CTTCGATGTG GGCGGGGGCT TGGGCGTCGA TTATGAAGGG
ACGCGCTCTC AATCTGATTG CTCCGTTAAC TATGGCTTGA ATGAATATGC CAATAACGTT
ATCTGGGGTA TCGGTGATGC CTGTAACGAA CATGGTTTGC CGCATCCTAC CGTTATTACA
GAATCTGGTC GTGCGGTTAC CGCTCACCAT ACGGTATTGG TGTCCAATGT TATCGGTGTA
GAGCGCAATG AGTTCTGTGA GCCGCAGCCA CCGGAAGCGG GCGCTCCACG TGCTTTGGAA
AGTTTATGGG ATACCTGGCA GGAGATGCAG GAACCGGAAA ACCGCCGTTC ACTGCGCGAA
TGGTTGCACG ATAGCCAAAT GGATTTACAC GACGTCCATA CCCAATATGC TCACGGTATG
CTGGATCTGA CTCATCGCGC TTGGGCAGAG CAACTTTATC TAAGCATTTG TAATGAGATC
CAAAAACAGT TGGATCCAAG CAACCGCGCC CACCGGCCCA TCATTGATGA GCTGCAAGAG
CGGATGGCTG ACAAGCTGTA TGTGAATTTC TCGCTGTTCC AGTCAATGCC GGATGCATGG
GGTATCGATC AACTGTTCCC GGTCTTGCCA TTGGAAGGGT TAGATAAGCC GCCAGAGCGC
CGTGCGGTAT TGCTGGATAT TACCTGTGAT TCTGATGGCA CCATCGATCA CTATATTGAT
GGTGATGGGG TGGCGACCAC CATGCCAATG CCACCGTATG ATCCGGAAAA CCCGCCATTG
CTAGGCTTCT TTATGGTCGG TGCTTACCAG GAAATCTTGG GTAATATGCA CAACCTGTTT
GGTGACACTG CGGCGGTAGA TGTTTATGTC TTCCCTGATG GCACGGTAGA GGTTGAGCAG
ACCGATGAAG GCGATACAGT GGCGGATATG TTGGAATACG TCCAATTGAA CCCTGAAAAA
TTGCTGGAAC ATTTCCGCGG TCAGGTAAAA GAAACCGATC TGGATACCGA ATTGCAGGCG
CAGTTCCTGG AAGAGTTTGA AGCTGGTTTG TACGGCTACA CATATCTTGA AGACGAATAA
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| Protein sequence | MSDDNLISRP LTAGAHVSLR SMQEVAMNDR NASKMLSTYN VAYWGGNYYD VNELGHISVC
PDPDIREARV DLAQLVKKMQ LEQGQRLPAL FCFPQILQHR LRSINAAFKR ARESFGYEGG
YFLVYPIKVN QHRRVIESLV NSGEPLGLEA GSKAEMMAVL AHAGMTRSVI VCNGYKDREY
IRLALIGEKL GHKVYLVIEK MSEIKMVLEE AERLNVVPRL GVRARLASQG SGKWQASGGE
KSKFGLSATQ VLQLVDMLRE ANSLESLQLL HFHLGSQLSN IRDISTGVRE SARFYVELHK
LGVNIQCFDV GGGLGVDYEG TRSQSDCSVN YGLNEYANNV IWGIGDACNE HGLPHPTVIT
ESGRAVTAHH TVLVSNVIGV ERNEFCEPQP PEAGAPRALE SLWDTWQEMQ EPENRRSLRE
WLHDSQMDLH DVHTQYAHGM LDLTHRAWAE QLYLSICNEI QKQLDPSNRA HRPIIDELQE
RMADKLYVNF SLFQSMPDAW GIDQLFPVLP LEGLDKPPER RAVLLDITCD SDGTIDHYID
GDGVATTMPM PPYDPENPPL LGFFMVGAYQ EILGNMHNLF GDTAAVDVYV FPDGTVEVEQ
TDEGDTVADM LEYVQLNPEK LLEHFRGQVK ETDLDTELQA QFLEEFEAGL YGYTYLEDE
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