Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0839 |
Symbol | |
ID | 6090321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 961216 |
End bp | 961947 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641595901 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001719593 |
Protein GI | 170023088 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000711088 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATAC CCCGCATTTA CCACCCACAG CCCTTGCAGG CCAATACCGA ACTGGCGCTC ACTGATGAAG CCGCAAATCA TGTCGGCCGC GTACTACGGA TGACTGAAGG GCAAAGCCTG CAATTATTTG ACGGCAGTAA TCAGATTTTT GACGCTGAAA TTATACGGGC AGATAAAAAG AATCTGATTG TCCGACTCGC TGAAGGGCAA TGGGAAGATC GGGAATCCCC TCTGAATTTA CATTTAGGGC AGGTTATTTC TCGTGGGGAA AAAATGGAGT TTACCGTCCA GAAATCCATT GAACTGGGCG TTAATGTGAT TACCCCGCTG TTTTCAGCAC GTTGTGGCGT TAAGCTTGAT GGCGAGCGTC TGACGAAAAA AATTCAACAG TGGCAAAAAA TTGCTATTGC CGCCTGCGAA CAATGTGGCC GCAATACGAT CCCAGAGATC CGCGATGCCA TGCAACTTGC TGATTGGTGT GCTGAATCCG ATGACAGCTT GAAACTGAAT CTGCACCCAC GTGCTAGCAA CAGTATTAAT ACCCTCCCTT CCTCACTCAA CAAAGTGCGT TTGCTGATTG GCCCAGAAGG TGGCCTCTCT GCTGATGAAA TTGCGATGAC CTCGCGCCTC GGATTTACGG ATATCCTGCT GGGGCCACGA GTGCTGCGAA CAGAAACTAC CGCCCTTACC GCAATTACTG CGTTGCAGGT GCGGTTTGGC GATCTGGGAT AA
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Protein sequence | MRIPRIYHPQ PLQANTELAL TDEAANHVGR VLRMTEGQSL QLFDGSNQIF DAEIIRADKK NLIVRLAEGQ WEDRESPLNL HLGQVISRGE KMEFTVQKSI ELGVNVITPL FSARCGVKLD GERLTKKIQQ WQKIAIAACE QCGRNTIPEI RDAMQLADWC AESDDSLKLN LHPRASNSIN TLPSSLNKVR LLIGPEGGLS ADEIAMTSRL GFTDILLGPR VLRTETTALT AITALQVRFG DLG
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