Gene YPK_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0837 
Symbol 
ID6091102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp959552 
End bp960115 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID641595899 
Producthypothetical protein 
Protein accessionYP_001719591 
Protein GI170023086 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.01957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAC AGCATCATTT TCTTATTGCC ATGCCCTCAC TTCAGGACCC TCAATTTAAA 
CGCTCGGTTA TCTATATCTG TGAGCATGAC GAAAAGGGGG CGATGGGTTT AGTGATTAAC 
AAGCCCTTGG AACAACTCAC CGTAGAAACA ATACTGGAAA AACTGAAGAT CAAATCCCCC 
TCACGCGACC CAGCAATACG TTTAGATAAC GTAGTATTAG CCGGTGGGCC TCTGGCTGAA 
GACCGTGGAT TTATTCTGCA TTCACCGCAG GAAGGCTTTG CTTCCAGTAT TCATATTTCA 
CCAGAGACGA TGATTACCAC CTCCAAAGAT GTGTTGGAAA CACTGGGAAC ATCGGGGCAA 
CCTAAAAATT TATTAGTGGC TCTGGGCTAC GCCAGCTGGC GGCAAGGGCA GTTAGAACAA 
GAGTTACTGG ATAATGTCTG GCTGACCACT GAAGCCGATA CCCATATTTT ATTCAATACG 
CCAATTGCCG AACGCTGGCA GGCAGCGGCC AATAAACTGG GCATTAATAT CTTTAATATT 
GCTCCGCAAG CAGGACATGC CTGA
 
Protein sequence
MNLQHHFLIA MPSLQDPQFK RSVIYICEHD EKGAMGLVIN KPLEQLTVET ILEKLKIKSP 
SRDPAIRLDN VVLAGGPLAE DRGFILHSPQ EGFASSIHIS PETMITTSKD VLETLGTSGQ 
PKNLLVALGY ASWRQGQLEQ ELLDNVWLTT EADTHILFNT PIAERWQAAA NKLGINIFNI 
APQAGHA