| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0834 |
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| Symbol | |
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| ID | 6088542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 956947 |
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| End bp | 958062 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641595896 |
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| Product | agmatine deiminase |
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| Protein accession | YP_001719588 |
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| Protein GI | 170023083 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.048656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTGC AAGACACGAT GTTACAACAA CAGGCATTAC CCGGCACACC GCGGCAGGAT
GGTTTCTTTA TGCCTGCAGA ATGGGCACCG CAGGATGCGG TATGGATGCT TTGGCCATAT
CGTCAGGATA ACTGGCGCGG CAAAGCTATT CCCGCTCAGC AGACATTCGC CAAAGTCGCC
GAGGCCATTA GCCGTGCTAC GCCAGTCTTT ATGGGCGTTC CCGCCGAGTT TATGGCACAA
GCCAAGGCAA CCATGCCGGC GAATGTGACC TTAGTGGAAA TGGCCAGTGA CGATGCCTGG
ATGCGTGATA CAGGCCCAAC GATGGTGATT AATGGTGCGG CCGAGCGCCG GGCCGTTGAC
TGGCAGTTTA ATGCATGGGG CGGCCTGAAC GGTGGCTTGT ATGCTGACTG GCAACAAGAT
GAAAAAGTTG CCGTTCAAGT CAGTGATTTT CTGAAAAACG CGCATTACAG TGCACCGTTG
ATACTGGAAG GTGGCTCCAT TCATACTGAT GGCGAAGGTA CGTTACTCAC CACTGCTGAA
TGTTTGCTAA ACCCGAATCG CAACCCACAT TTGAATCAAG CGCAAATCGA ACAGTTACTG
TGTGACTATC TGGGGGTGAC TCACTTCATT TGGTTGCAAG ATGGCGTGTA TAACGATGAG
ACCGATGGTC ATATCGATAA TATGTGCTGT TTTGTCCGCC CAGGCGAAGT AGCCCTGCAT
TGGACAGACG ACCAGCAGGA TCCACAGTAT GCACGTTCAG TCGCAGCGTT CGAGGTGTTA
TCCAATACCG TCGATGCCAA AGGGCGTAAA CTGAAAATCT GGAAGTTACC GGCTCCCGGC
CCACTTTATA ACACGGAAGA GGAAACCTTC GATGTGTTGA CCAGCGATGC GGTTCCCCGC
ACGGCGGGTG AACGCCTGGC GGGCTCTTAT GTCAACTTCC TGATCAGTAA CCAGCAAATT
ATTTTCCCAC TGCTGGATAG CCGCACTGAC GGGCAGGCTA ACGATCTGTT ACAACAAATG
TTCCCCGGCT ACGCAATTGT CGGCGTGCCT GCCAGAGAGA TTTTACTCGG TGGCGGTAAC
ATACATTGCA TTACTCAGCA GATCCCAGCG GCTTAA
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| Protein sequence | MSVQDTMLQQ QALPGTPRQD GFFMPAEWAP QDAVWMLWPY RQDNWRGKAI PAQQTFAKVA
EAISRATPVF MGVPAEFMAQ AKATMPANVT LVEMASDDAW MRDTGPTMVI NGAAERRAVD
WQFNAWGGLN GGLYADWQQD EKVAVQVSDF LKNAHYSAPL ILEGGSIHTD GEGTLLTTAE
CLLNPNRNPH LNQAQIEQLL CDYLGVTHFI WLQDGVYNDE TDGHIDNMCC FVRPGEVALH
WTDDQQDPQY ARSVAAFEVL SNTVDAKGRK LKIWKLPAPG PLYNTEEETF DVLTSDAVPR
TAGERLAGSY VNFLISNQQI IFPLLDSRTD GQANDLLQQM FPGYAIVGVP AREILLGGGN
IHCITQQIPA A
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