| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0832 |
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| Symbol | |
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| ID | 6090238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 954996 |
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| End bp | 955694 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641595894 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001719586 |
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| Protein GI | 170023081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.399806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTA TCCAACAGAA TCTACAGGAT GTCAGAGCGC GGATCGCAAC GGCTGCACAC
AATTGCGGGC GCTCTCCAGA AGAAGTTACA TTGCTTGCAG TCAGTAAAAC CAAACCTGTG
GCGGCTATCG AAAAAGCCAT CGCCGCTGGG CAATATGCTT TTGGTGAAAA CTATGTGCAG
GAAGGGGTGG ATAAAATTCA CTCCTTCGTG GATAACAAAA CGCTTGAATG GCACTTTATC
GGGCCGCTGC AATCCAATAA AAGCCGGTTA GTGGCTGAAA ATTTTGCCTG GTGTCATACC
GTTGATCGGT TGAAAATAGC CCAGCGTCTG AGTGCCCAGC GCCCAGCGGC TATGCCAGCG
TTAAACGTAC TGATTCAGAT TAATATCAGT GATGAGCAAA GCAAAGCGGG GATTTCCTTG
AGTGAACTCC CCGCCTTGGC TGACAGCATT AGTACATTAC CTAACCTGTG TTTACGCGGG
CTGATGGCTA TCCCAGCGCC AGAACATGAT TATCAGCGGC AATTGGCCGT ATTTACGCAA
ATGAATCAGG CGTTCTTGAC TTTAAAAGCC CGCTACCCTC AGATAGATAC ACTTTCTATG
GGGATGACTG ATGATATGGA CGCCGCCATT AGCGCCGGCA GTACACTGGT TCGAATTGGT
ACCGCCATTT TTGGTGCCCG CGTTTATAAC GCGGATTAA
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| Protein sequence | MSTIQQNLQD VRARIATAAH NCGRSPEEVT LLAVSKTKPV AAIEKAIAAG QYAFGENYVQ
EGVDKIHSFV DNKTLEWHFI GPLQSNKSRL VAENFAWCHT VDRLKIAQRL SAQRPAAMPA
LNVLIQINIS DEQSKAGISL SELPALADSI STLPNLCLRG LMAIPAPEHD YQRQLAVFTQ
MNQAFLTLKA RYPQIDTLSM GMTDDMDAAI SAGSTLVRIG TAIFGARVYN AD
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