Gene YPK_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0818 
SymbolmltC 
ID6089957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp934906 
End bp935994 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content46% 
IMG OID641595880 
Productmurein transglycosylase C 
Protein accessionYP_001719572 
Protein GI170023067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.477613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGTA AGATGAAGAA AATTTTAGCT TTGCTGGTAA TCGCCCCCTT ATTAGTGTCT 
TGTTCGGGCA ACAAAAATCA GGTTGAAAAC GAAGTTTTTG TCAAAGACAC CAATGGTTTT
GAGATTTTAA TGGGCCAATT TGCCCATAAC ATTGAAAATA TTTGGGGCTT AAAAGAAGTC
TTAATCGCTG GTCCAAAAGA TTACGTTAAG TACACGGATC AATATCAAAC CCGCAGCCAT
ATCAATTTTG ATGCTGGTAC CATTACGATA GAGACGATCG CCACGACCAA TCCGGCGGCA
CATTTACGTC AGGCGATCAT CACAACGCTA CTGATGGGTG ATGATCCAGG CTCGATCGAC
CTCTATTCTG ATGTAAACGA TATTCAGATC AGTAAAGAGC CGTTCCTCTA TGGCCAGGTG
CTGGACAACA ATGGCGAACC AATCCGTTGG GAATGGCGGG CAGCCCATTT TGCTGATTAT
TTGCTACAAA ACAAAATGCA AACACGGACT TCCGGTTTGC ATGTGATCTC GTTCGTTACC
ATACAGTTAG TGCCAAACCA TCTGGACAAA CGGGCGCATA AATACCTGCC ATTGGTACGG
AAATCAGCAG CACGTTACGG CGTGGAAGAG TCTTTGATTC TCGCCATTAT GCAAACCGAA
TCGAGCTTCA ACCCCTATGC CGTCAGCCGT TCTGATGCGC TCGGTCTGAT GCAGGTGGTT
CAACATACTG CAGGAAAAGA TGTATTCAAA CTGAAAGGCA AAAGTGGCCA ACCAAGCCGC
AGCTATCTGT TTGATCCTGA AAATAATATC GACGCAGGCA CCGCATATTT ATCTATTCTG
CAAAATACCT ATTTGGGGGG GATTCAAAAT GCCACCTCAC GGCGTTATGC CGTGATCACC
TCCTACAACG GCGGCGCAGG TAGCGTATTG CGCGTGTTCC ACAGCGATAA AAATAAGGCA
GTGGGTATCA TTAACACGAT GTCACCAGGG GATGTGTTCC AAACACTCAC GACCAAGCAT
CCATCAGGTG AATCCCGCCG TTATCTGGTG AAAGTGAACA GCGCACAGAA GAACTATCGC
CGCTATTAG
 
Protein sequence
MACKMKKILA LLVIAPLLVS CSGNKNQVEN EVFVKDTNGF EILMGQFAHN IENIWGLKEV 
LIAGPKDYVK YTDQYQTRSH INFDAGTITI ETIATTNPAA HLRQAIITTL LMGDDPGSID
LYSDVNDIQI SKEPFLYGQV LDNNGEPIRW EWRAAHFADY LLQNKMQTRT SGLHVISFVT
IQLVPNHLDK RAHKYLPLVR KSAARYGVEE SLILAIMQTE SSFNPYAVSR SDALGLMQVV
QHTAGKDVFK LKGKSGQPSR SYLFDPENNI DAGTAYLSIL QNTYLGGIQN ATSRRYAVIT
SYNGGAGSVL RVFHSDKNKA VGIINTMSPG DVFQTLTTKH PSGESRRYLV KVNSAQKNYR
RY