Gene YPK_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0783 
Symbol 
ID6089741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp889917 
End bp891245 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content54% 
IMG OID641595844 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_001719537 
Protein GI170023032 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC CTCTGGATTT CATCGGCATT GGCATCGGCC CATTTAACCT CAGTATTGCC 
GCACTTGGCA GTGAAGTTTC TGGCTTTAAC AGTAAATTTC TCGAACGTAA ACCGCACTTT
TCCTGGCACC CTGGCATGAT GGTGCCGGAC TGCCATATGC AGACCTGCTT CCTGAAAGAC
TTGGTCAGCG CAGTCTCCCC GACTAACACG TACAGCTTTC TTAACTATCT GGTGCAGCAT
AAGAAATTCT ACCGTTTTCT GACCACCGAG CACCGGACCG TTTCCCGTGA GGAGTTTGCG
GACTACCTCC GTTGGGCCGC CAGTGGCATG AGTTCGCTCG AGTTTAGCCA AGATATTCAG
AGCGTGGACT TTGACGACCA GCAGCGCCAT TTTGTCGTTA CCACCCCGCG TAATGTCTAC
CACGCGCGCC ACGTTTGCCT GGGGATAGGC AAACGCATCA AATTGCCAGA CTGCGTGACC
GAGCAAAATG ACCGCTGCTT CCATGCCAGC GAAATGGCAC TGCGTAATCC AGATCTGACC
GGTAAACGCG TCACCATTGT GGGCGGCGGC CAGAGCGGGG CGGACCTGTT CCTGAACATC
TTTCTCGCTG CATGGGGGCA GCCAAAGCAG CTGAACTGGA TTTCACGCCG TAACAACTAC
AACGCGCTGG ATGAAGCCGC TTTTGCCAAT GAGTACTTCA TGCCGGAATA CGTTGAGAGT
TTCTACACCC TGAACGACAG CGCCAAACAG CATATGCTGG CAGAACAGAG AATGACCTCT
GACGGCATTA CCAGTGAATC ACTACTGGCG ATTTACCGTG CTATGTACCA CCAATTTGAA
GTGTTACATG AAAAACCGTG GGCGCGCCTG CTCCCCAGCC GCTCACTGAC CAATATGCAT
ACGCGCGGCA ACGGTTACCA ATTACTCACC CATCACCATC TCGATCAAGG CACAGAAACT
TTTGATACCG ATGTGGTAAT CTTCGCCACG GGTTATCAGC AGGATCGACC GGCGTTTCTC
GATCCATTAG CTGATCGTCT GCAAACCACC GCCGATTGCC AGTACCAAGT GGCTCCAGAT
TTTGTCCTCG ACTGGCAAGG CCCGCGTGAA AACTGCTTGT TCGCCGTGAA TGCCGGTATG
CATAGCCACG GCATTGCCGA ACCTCAGCTC AGCCTGATGG CTTGGCGATC AGCACATATT
CTCAACCGGG CTTTAGGGCG CACTCAGTTC GATTTAACTT CCACCCCGGC GGTGATCCAA
TGGCGCAGCC AACAGTCGGG TGTCCCTGCC CACCCGGAAC ATCCCGTGCT CAACTGCATC
GACATTTAA
 
Protein sequence
MNQPLDFIGI GIGPFNLSIA ALGSEVSGFN SKFLERKPHF SWHPGMMVPD CHMQTCFLKD 
LVSAVSPTNT YSFLNYLVQH KKFYRFLTTE HRTVSREEFA DYLRWAASGM SSLEFSQDIQ
SVDFDDQQRH FVVTTPRNVY HARHVCLGIG KRIKLPDCVT EQNDRCFHAS EMALRNPDLT
GKRVTIVGGG QSGADLFLNI FLAAWGQPKQ LNWISRRNNY NALDEAAFAN EYFMPEYVES
FYTLNDSAKQ HMLAEQRMTS DGITSESLLA IYRAMYHQFE VLHEKPWARL LPSRSLTNMH
TRGNGYQLLT HHHLDQGTET FDTDVVIFAT GYQQDRPAFL DPLADRLQTT ADCQYQVAPD
FVLDWQGPRE NCLFAVNAGM HSHGIAEPQL SLMAWRSAHI LNRALGRTQF DLTSTPAVIQ
WRSQQSGVPA HPEHPVLNCI DI