| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0781 |
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| Symbol | |
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| ID | 6088729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 885966 |
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| End bp | 887390 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641595842 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001719535 |
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| Protein GI | 170023030 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG ACAGCCAGCA CCTCTGTAGC TTGAAGGACG AAGGGGATAA AAGGCTAAAA
ATAAATATGA ACAATTCAGG CATGAAAATC CCAATGAAAG AGCTGGCGTC TTATTTTGGG
TATGGGATGG GGCAGTGTTT CAGTTTTGGG TTGGTTGGGA CTTTTATTCT CTTTTTCTAT
ACTGACATTA TGGGGATCTC GCCGGTAGCA GCCAGTATGA TCTTTTTAAT TGCCAGGGTA
TGGGATGCTA TACATGACCC ATTAATTGCC GGTGTAATGG ATACTATTAA TATGCGGCGC
GGGAAATTCC GCCCATATTT GCTGTTTACT CCCTTCTTGA TTTTCCTTGT TACGGTCGCT
GCGTTTTATA ATATCGAAGC CAGCTTGATG ACTAAAACGA TCTACGCAGG TGTGACTTAT
ATCCTGTGGG GGACGCTCTA CGCTCTCTCT GATATCCCGT TTTGGTCAAT GAGCACCGTG
ATGACGGATG AACCGCAAGA GCGAGCTAAA ACAGCGACCT GCGCGATGTT GGGCGTGAAT
GCGGGTATCG GCGCTACGAT GATTTTATTC CCTTATATCA GCGGGTTATT TGCTGAGAAC
AGTGCTGATC GTGGTTATTT TGCGGGTGTT GTTATCCTCA TGGTTTTGGG GGTGATACTC
ATGTTGAATG GGTTCTTTAA TACAAAAGAA CGCGTCAACG TCACGGTGAC GGAAAAGGTC
ACGTTAAAGC AGACATTTAT TGTGGTCTGG CAAAATAAGC CGCTATTTTT TATTCTTAGC
GCCTTTTTCA TGAATGTGTT TTCTAACATC GTGAATACTT TTTATATTTT CTTTTTCACT
TATAACATGG GGGATGCTGA GCTGGTTTCT GTTATCGGCT TAATTACATT CACCTGTGCT
TTAGCTTGTC TGGGAACGCC ATTCTTAACC CGCCATTTTA AGAAGCGAGA TTTATTCATT
ACATTATGTG TGTTGGAGAT CATCGCTCGC GTTGGTTTCT GGTTCACCGG TTATAATAAT
GTCGTGTCAG TCATGGTATG GCTAACCGTG ATCACTGCCA TCTTCATGAT GACGAATCCA
CTTATTTCCG CGATGATTGC CGATACTGTG GAATATTCCT ACTATCACAC CGGTAAGCGC
TGCGCGGCCA TTACGTTCTC CGGACAGACT TTTGTCGGTA AATTGTCGGT CGCTGTTGCT
GGCGGTGTCT CTGGCCTGAT CCTGTCAATA TTGGGATATA TGCCTAATGT GGCCCAATCG
ACATGGACAT TGAATGGCCT ATTTTTCTGT ATTTCTCTGT TGCCCGCCGT GGGTGCCGTG
GTTCGTATCC TCATTATGCG TAAATATAAA TTTACCGAAG ATGAACATGC AATTCTTCGT
GAAGAACTGA AACAAGGGAG ATTCCACTCT TCAGTAGGCA AATAA
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| Protein sequence | MSQDSQHLCS LKDEGDKRLK INMNNSGMKI PMKELASYFG YGMGQCFSFG LVGTFILFFY
TDIMGISPVA ASMIFLIARV WDAIHDPLIA GVMDTINMRR GKFRPYLLFT PFLIFLVTVA
AFYNIEASLM TKTIYAGVTY ILWGTLYALS DIPFWSMSTV MTDEPQERAK TATCAMLGVN
AGIGATMILF PYISGLFAEN SADRGYFAGV VILMVLGVIL MLNGFFNTKE RVNVTVTEKV
TLKQTFIVVW QNKPLFFILS AFFMNVFSNI VNTFYIFFFT YNMGDAELVS VIGLITFTCA
LACLGTPFLT RHFKKRDLFI TLCVLEIIAR VGFWFTGYNN VVSVMVWLTV ITAIFMMTNP
LISAMIADTV EYSYYHTGKR CAAITFSGQT FVGKLSVAVA GGVSGLILSI LGYMPNVAQS
TWTLNGLFFC ISLLPAVGAV VRILIMRKYK FTEDEHAILR EELKQGRFHS SVGK
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