Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0772 |
Symbol | |
ID | 6090009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 877295 |
End bp | 878278 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641595833 |
Product | RHS protein |
Protein accession | YP_001719526 |
Protein GI | 170023021 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.728642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAAC CATCCGCTGT GAATATGATC GGGAAGATAA TCTACTTTCA ACGGCCGACC AAACTGCTTG ATGGGCTGCG GGTGATCGAC AAAGAGACCC CCTCGCGCGG TGAACCGGTG TGGCAGGATG AAACCTGGTT TATGTGGGAC GGTGACGTGA TGGTGGGCGA GTTGCAGCGT GAAGTTGCTC CCCGGGTGGT GACGCCTGAA ACCTGGGACA AACCGGATGG TATCGTCTAC AGCGGCCAGT TTTACGTGTA TCAGCCAGAT AGCTTCGAAC CCCGCGCCAT GCAGCGTTAT CAACAGATTG CGGAAGCTGA AGACGGCGAA ATCGCGCCAT TAGGCGAAGA GCAGATTTAT TTCTACCAGA ATGACCCGAA CGGTATGCCG ATCCGCCTGC AGGATGGCGA AGGCGAAGTG GTATGGGAAG CACAGTTCAC CCCGTTCGGG CAACTGAGTG TCACGGGTAC CAGCCAACTG CGCCAGCCGC TGCGCATGCA GGGCCAATAT TACGACACGG AAAGCGGTTT ACATTATAAC CGCTACCGTT ATTATGATCC GGCCTGCGGT GTGTTTATCA GCCAGGACCC AATAGGGTTA AAAGGCGGAT TAAATCCTTA CCAGTTTGCA GTGAATACGC TGGGATGGGT GGATCCGCTG GGGTTGACAG GTATTATTTA TTTAAGAACG GATCGTAGAT CTGGTCGAGA ATATATAGGT AAATCAAAGA ATCAACAAAC TTATGAAAAA CGTAAAAAGG CACATGATAG AAAAGCAAAG AAAAATGATC CGACACATCA AGGATATAAT TTTGTCGAAT TAGAGCAATC TATAGTAGGG GCCGATCCGC TAGCAAAAGC TGAAGAAGAT TGGATTCGTG CAGGTGAGGG GCCAACTGGA GTTAATGGAG CAGGATTGGA AAATGAACGT CATGAAATGA ATGATGATCG CTATGCTAAC AATGGGGGAT GCATGAAAAA ATGA
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Protein sequence | MPEPSAVNMI GKIIYFQRPT KLLDGLRVID KETPSRGEPV WQDETWFMWD GDVMVGELQR EVAPRVVTPE TWDKPDGIVY SGQFYVYQPD SFEPRAMQRY QQIAEAEDGE IAPLGEEQIY FYQNDPNGMP IRLQDGEGEV VWEAQFTPFG QLSVTGTSQL RQPLRMQGQY YDTESGLHYN RYRYYDPACG VFISQDPIGL KGGLNPYQFA VNTLGWVDPL GLTGIIYLRT DRRSGREYIG KSKNQQTYEK RKKAHDRKAK KNDPTHQGYN FVELEQSIVG ADPLAKAEED WIRAGEGPTG VNGAGLENER HEMNDDRYAN NGGCMKK
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