Gene YPK_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0772 
Symbol 
ID6090009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp877295 
End bp878278 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content49% 
IMG OID641595833 
ProductRHS protein 
Protein accessionYP_001719526 
Protein GI170023021 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3209] Rhs family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.728642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAAC CATCCGCTGT GAATATGATC GGGAAGATAA TCTACTTTCA ACGGCCGACC 
AAACTGCTTG ATGGGCTGCG GGTGATCGAC AAAGAGACCC CCTCGCGCGG TGAACCGGTG
TGGCAGGATG AAACCTGGTT TATGTGGGAC GGTGACGTGA TGGTGGGCGA GTTGCAGCGT
GAAGTTGCTC CCCGGGTGGT GACGCCTGAA ACCTGGGACA AACCGGATGG TATCGTCTAC
AGCGGCCAGT TTTACGTGTA TCAGCCAGAT AGCTTCGAAC CCCGCGCCAT GCAGCGTTAT
CAACAGATTG CGGAAGCTGA AGACGGCGAA ATCGCGCCAT TAGGCGAAGA GCAGATTTAT
TTCTACCAGA ATGACCCGAA CGGTATGCCG ATCCGCCTGC AGGATGGCGA AGGCGAAGTG
GTATGGGAAG CACAGTTCAC CCCGTTCGGG CAACTGAGTG TCACGGGTAC CAGCCAACTG
CGCCAGCCGC TGCGCATGCA GGGCCAATAT TACGACACGG AAAGCGGTTT ACATTATAAC
CGCTACCGTT ATTATGATCC GGCCTGCGGT GTGTTTATCA GCCAGGACCC AATAGGGTTA
AAAGGCGGAT TAAATCCTTA CCAGTTTGCA GTGAATACGC TGGGATGGGT GGATCCGCTG
GGGTTGACAG GTATTATTTA TTTAAGAACG GATCGTAGAT CTGGTCGAGA ATATATAGGT
AAATCAAAGA ATCAACAAAC TTATGAAAAA CGTAAAAAGG CACATGATAG AAAAGCAAAG
AAAAATGATC CGACACATCA AGGATATAAT TTTGTCGAAT TAGAGCAATC TATAGTAGGG
GCCGATCCGC TAGCAAAAGC TGAAGAAGAT TGGATTCGTG CAGGTGAGGG GCCAACTGGA
GTTAATGGAG CAGGATTGGA AAATGAACGT CATGAAATGA ATGATGATCG CTATGCTAAC
AATGGGGGAT GCATGAAAAA ATGA
 
Protein sequence
MPEPSAVNMI GKIIYFQRPT KLLDGLRVID KETPSRGEPV WQDETWFMWD GDVMVGELQR 
EVAPRVVTPE TWDKPDGIVY SGQFYVYQPD SFEPRAMQRY QQIAEAEDGE IAPLGEEQIY
FYQNDPNGMP IRLQDGEGEV VWEAQFTPFG QLSVTGTSQL RQPLRMQGQY YDTESGLHYN
RYRYYDPACG VFISQDPIGL KGGLNPYQFA VNTLGWVDPL GLTGIIYLRT DRRSGREYIG
KSKNQQTYEK RKKAHDRKAK KNDPTHQGYN FVELEQSIVG ADPLAKAEED WIRAGEGPTG
VNGAGLENER HEMNDDRYAN NGGCMKK