| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0763 |
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| Symbol | |
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| ID | 6089891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 860468 |
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| End bp | 864232 |
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| Gene Length | 3765 bp |
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| Protein Length | 1254 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641595824 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001719517 |
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| Protein GI | 170023012 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATAC AATTTAGAGA GCCTATTTCT ACCTCACCCG CTCAACCGGA TGCAGGGCAC
CGACACCTCT TCAGTTGTGC TCCTGCAGCC GCGATTAATC CCATCACATT GGCGATTATT
GTTGCGTTCT CCGCCCTCGT CTTGCCACAA ACCGCACGGG CGTCGTGTAA TAGCTCGGGG
GGGGGCACCT ATGTTTGCGA AGGTGAAAAT CATGCTGGGA TCATCTTGAG CGGCACAGAT
ATTGCCGTTG AGACCCAGCC CGGTTTTAGC ATCACAGAGC CCGGAGGTGC GGATCCTGCG
CTCTCGTTAA TTGGTTCTGG TGCCATCAGC TACCTTGATA CCAACAGGTC TGCGCTTGAT
ACCACCGGTG CCGATTCTTT GTATATCCAG AATGATACCT CGATGGCTGG GCAATCGACG
TCCATTAATA TTCAGTCCAA CAGTTCGATT GGTAGCGGTA TCAACATTAA CAACCGCAGT
GGCGCTGATG CGGCTATACA GATAGATCTC TCCGGCACGT TATCCGGTAA CCAAAATGGC
TCTGCGGCCC TCTCAATCCA TTCATCGGCT GAGGGTAATT CTGCGTTCAT ATTGAATCTC
GATGCTCTGT CTGGTTCTAT GGGTCTGCAG AGCTACAATG ATTCACGCAG TGGAATAGCC
ACCACTAATA TCAATATTGT CAACGATATT AACGTCGAAT ATTCGGGTGC TTCTATTAAC
AACACCGGCA ATGGTGAGAC CAGCATAATT AATTTCAACT CAAAAAATAT CACGACAGAA
TTCGATGGCT TGAATGTTTA TAATACGAAT TATGCTGGGG CGGCGATTAC CAATATCAAT
ATTGATGGCG ATATCCGTTC AGCCAATAGC CAAGCTGCCA CTTTTTATAA TAGTGCTTAT
GAGGGTCCTT CAAGCCTTAG GCTTCGGGCG AACCATGTCA CGGGTGAATA TGCTGGCCTT
TATATCAGCA ATGATAGCCG TAAGAGCTCA GCGATAACCG ATATCCTGTT GACCGGGGAT
CTTACGTCTA CTTCAGGGGC GGGTCTCGTG TTCAATTCCT ATGTGGAAGA GGACGACATC
GGGGCATCTA TCAAGTTAAA TAATATCTAT TCTTACTACG AAGCGCTCAG TTTAAGTGCA
AATACCTTAA ATGGCGACAT GCAGTTTGAC CTTGATATTT CAGGCGATAT TGTTAACGAA
TATGGTACCG GAATTTTAAT GATGGGGATG GCTTCTGAAG GTAACTCCAC CATAATCATC
AATGCGAATA ATATTAATTC CGGCAGCCAA TCGCTCAAAG TTAACAACTA TAGCCATTTA
GGAACCGCCG TTTCTGACAT TACCGCAACC GGGCATCTCG TCTCTGAACA GGGGGTAGGG
GCAATATTCA GTACCTATGT CAGTCAGGGG GATGCTATCG CTGTCATTAA TTTAAATGAC
ATCACTGCTG CGGGCAGTAG TGTAGAGATA GACACCATAG CGAGTGAGGG GAATTCAATC
ACCTACCTCA CCGTGACGGG CCAGATTAAC GCCAGTAACG GAGAGGGTAT TACCCTTAGT
TCGCAAGCCA CTGACGGCAG CACCCTGGTC AACATTGACG TCAATAATAT CGCCAGTGAA
TACGATGCTA TTTACCTCCA TAACTCTGTT ACTGGCGTAG ACAACGGCAC ATCGACCATT
GATCTGATCA CCCGGGGCGC GCTGGTTTCG CAGCAGGGCT ACGGGATTAA TATTGAAACC
AATACCGCAG ACACCTATGT CACCGTGGGC GGCTTGGTGC ACGGCGGCAA CGGTACCGCA
ATTGGCATTC ATCGGCTCGA AAATGTTCAA ACATCGGCCA CGTTAGAGCT GCAATCTGGC
TATGCCCTTG AAGGCGTTAC ACAGGCACTG GTCTTCACTG GCAGTTATGC GGAGATCAAT
GATGCCGCGT TGGATCTGGC AAATAGCCAT CTGGTGCTGG GCGGAACAGG AGATGCTGTT
TTCGATCTCA CGCGTATTGA TAACCGTGAA GAGGCCATTC TGGATGGCGA CCCGAACCGG
ATCACCGGTT TCGGCACCCT GACCAAAACC AACAACAGCA TCTGGACATT AACCGGATCC
AATATGGCCG ACGGTGACGC CAATGCCTTC CTGTCGGCCA ATATCGCCGG GGGGATTTTG
GTGCTGGATA ACGCCACGTT GGGCCTGACG CCTGCCACCA CCATATTAAA TCGCCTCAGT
GCCGCCGATA TCGCCGCTGA CCCGACGCGG GTGGCTACCG AAACCGGTGC ATTAACCCTG
GCTGAAGGCG GCGCGCTGTC CTCGCTCGGT GACTCGGTTC TGAGCGGCAA CCTCATCAGC
GCTGGCGGGA TCCTGCTGTC AAACCACTAT ACCGGCGGCA ATGGTGCCGC TACCGATGAT
CGGCTGACCG TGACCGGGAC TTATTTTGGT GAAAATAACG GTTCCGGTGA AGGGGCCTGG
CTGGCACTCG ATACGGTGCT GGGGGATGAC GATTCTGCCA CCGACCGGTT AGTGATCAAC
GGCGATGCCA CCGGCACCAC CTCGGTCCGG GTGAACAATG CGGGCGGTCT GGGCGATAAA
ACCCGCAATG GCATCAATCT GATCACCGTG GACGGTCTGG CGCAGGATGA CACCTTCCTG
CTGGCCGGGG ACTATGTCAC CACGGATGGC TATCAGGCGG TGGTGGCCGG GGCGTATGCC
TACACCTTAC AGGCCGACGG GGAAGCCGCT ACCGCAGGCC GCAACTGGTA TCTCTCGTCA
GAACTGATGC TAACCGAGGG CGTGCGCTAT CAGGTGGGCG TGCCGCTGTA TGAACAATAT
CCGCAGGTGC TGGCCGCCCT GAATACCCTG CCGACGCTGC AACAGCGTGT CGGTAACCGT
TACGGGGCAC CGGGCGCACT GGCAGATCTG AACTTTGACG ATAATCAATG GGCCTGGGGC
CGTATTGAAG GGAGCCACCA GGTCACCGAC CCGGCCCGAT CCACCAGCGG TTCACAACGT
GAGATTGATG TGTGGAAGTT GCAGACCGGC ATTGATGTGC CGTTGTATCA GAGCCAGGGC
GGTTCACTGC TGACCGGCGG GGTGAACTTC ACCTACGGAA AAGCCAAAGC GGATATCCAC
TCATTCTTTG GTGATGGCCG CATCAACAGC GCAGGTTACG GTCTTGGCAC CAGCCTGACC
TGGTATGGCA ATAACGGCGT GTATGTGGAT GGCCAGTTGC AGACGATGTG GTTTGACAGC
GACCTGAGCT CCCGTACCGC AGGGCATGCA GTGGCCAGCG GTAACAATGG TCGCGGGTAT
ACCTCGGCGA TAGAAGCCGG TAAAGGTTAC GCACTGGGTA ACGGGTTGTC ACTGACCCCG
CAGATGCAGG TGACCTACTC GCGGGTCGAT TTCGATACCT TCCGCGATCC GTTTGATAGC
GAAGTCTCGC TGCAAGAGGG TGACAGCCTG CGGGGCCGCA TTGGTGTCTC ACTGGATAAG
GAAACGACCT GGAGCGCGAA AGACGGCACC ACCCGCCGCT CACACATTTA CAGTCATCTC
GATCTGCACA ATGAGTTCCT TAACGGCAGT AAAGTGCAGG TCTCGGGGGT GGAGTTCGCC
ACCCGGGATA AGCGTCAGTC GGTGGGTTTA GGCGCGGGTG GCACGTATGA ATGGCAGAAT
GGTCGCTACG CGGTTTACGG CAATGTCAAT CTGCTGGGGG CTACACGGAA TGTCAGTGAC
AATTATGCCG TCGGCGGCAC GATAGGCGCA CGGGTGAGTT GGTAA
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| Protein sequence | MYIQFREPIS TSPAQPDAGH RHLFSCAPAA AINPITLAII VAFSALVLPQ TARASCNSSG
GGTYVCEGEN HAGIILSGTD IAVETQPGFS ITEPGGADPA LSLIGSGAIS YLDTNRSALD
TTGADSLYIQ NDTSMAGQST SINIQSNSSI GSGININNRS GADAAIQIDL SGTLSGNQNG
SAALSIHSSA EGNSAFILNL DALSGSMGLQ SYNDSRSGIA TTNINIVNDI NVEYSGASIN
NTGNGETSII NFNSKNITTE FDGLNVYNTN YAGAAITNIN IDGDIRSANS QAATFYNSAY
EGPSSLRLRA NHVTGEYAGL YISNDSRKSS AITDILLTGD LTSTSGAGLV FNSYVEEDDI
GASIKLNNIY SYYEALSLSA NTLNGDMQFD LDISGDIVNE YGTGILMMGM ASEGNSTIII
NANNINSGSQ SLKVNNYSHL GTAVSDITAT GHLVSEQGVG AIFSTYVSQG DAIAVINLND
ITAAGSSVEI DTIASEGNSI TYLTVTGQIN ASNGEGITLS SQATDGSTLV NIDVNNIASE
YDAIYLHNSV TGVDNGTSTI DLITRGALVS QQGYGINIET NTADTYVTVG GLVHGGNGTA
IGIHRLENVQ TSATLELQSG YALEGVTQAL VFTGSYAEIN DAALDLANSH LVLGGTGDAV
FDLTRIDNRE EAILDGDPNR ITGFGTLTKT NNSIWTLTGS NMADGDANAF LSANIAGGIL
VLDNATLGLT PATTILNRLS AADIAADPTR VATETGALTL AEGGALSSLG DSVLSGNLIS
AGGILLSNHY TGGNGAATDD RLTVTGTYFG ENNGSGEGAW LALDTVLGDD DSATDRLVIN
GDATGTTSVR VNNAGGLGDK TRNGINLITV DGLAQDDTFL LAGDYVTTDG YQAVVAGAYA
YTLQADGEAA TAGRNWYLSS ELMLTEGVRY QVGVPLYEQY PQVLAALNTL PTLQQRVGNR
YGAPGALADL NFDDNQWAWG RIEGSHQVTD PARSTSGSQR EIDVWKLQTG IDVPLYQSQG
GSLLTGGVNF TYGKAKADIH SFFGDGRINS AGYGLGTSLT WYGNNGVYVD GQLQTMWFDS
DLSSRTAGHA VASGNNGRGY TSAIEAGKGY ALGNGLSLTP QMQVTYSRVD FDTFRDPFDS
EVSLQEGDSL RGRIGVSLDK ETTWSAKDGT TRRSHIYSHL DLHNEFLNGS KVQVSGVEFA
TRDKRQSVGL GAGGTYEWQN GRYAVYGNVN LLGATRNVSD NYAVGGTIGA RVSW
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