Gene YPK_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0754 
Symbol 
ID6090157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp847858 
End bp848985 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content49% 
IMG OID641595815 
Productthiazolinyl imide reductase 
Protein accessionYP_001719508 
Protein GI170023003 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4693] Oxidoreductase (NAD-binding), involved in siderophore biosynthesis 
TIGRFAM ID[TIGR01761] thiazolinyl imide reductase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAAC CTCAGAAAAT CGTGGTCTGC GGCACTTTAT TTGGGCAGGT TTATCTCTCC 
GCCTTTAAGA CGGCCTTTGA GAAGGGAGCG TTGGCGGGCA TTCTCGCACA AGGAAGTGAG
CGTTCCAGGC AATTAGCACA CGCCTATGGT GTCCCGCTAT ATCATCATGT TGATGAATTA
CCTGATGATA TAAATATGGC TTGTGTGGTG ATCCGCTCCA CTATCGTGGG GGGGAAAGGC
AGTGAAATCA CGAAGGCGTT ATTAAAACGG GGCATTTCAG TATTACAAGA GCATCCAGTT
TGTCTTGAAG ATGTGGCTGA GTGCCTGAGG TTGGCTCGTC AACAGGGCTG CCATTACCAG
GTGAATACGC ATTATCCCCA TGTGCCCGCA GTACGCCAAT TTATCGCCTA TTTGCACGAG
GCCATGCAAA CCCAAAAACC GTGTTTTATT GAGGCAACTT GCGGGGTTCA AGTCATTTGC
GGGTTGCTGG ATATCATTGG GCGTGTATTG GGGGGGCATT TTTCACCTTA TGGTTTTAGC
GTGGCAGGCG GTGACGTGTT ACTGCGTTCA CTGCTGGAAA ACCCTGCGCC ATATACCCAG
CTACAGGGTG TGATTGCGGG TGTCCCCCTT ACCTTAAATT TGCAAAATCA GTTAGACCCA
GCCGCTCCTG ATAACCATTT TCATATCATG CACCGCCTGT GTGTGGGGTT ACCTAGTGGC
AATCTACTCT TGGTCAATAC ACATGGGCCG GTTATCTGGA GCCCCTATTT TCATATTCCG
AGGGTGAGAA CTCCTTTCGG CTGTCGTGAG GTTATCGACC CCGATGACGC TCCACACTAT
TTTCTGCCCC CCCTGAGTCA ACTTTTTTCA CAGGAAAGTG ACAATCTGTT AAGCGTCTTG
CACCACCAGT GGCCCTCGGC GATACGTCAT GCTCTGCGAG AATTTATCGA GCAACAGCAG
CATTCGTCAC CTGCTTATGC GCAATTCCTG CTCTCGCTAA CACAAGTATG GAAAACACTT
ATGGAAAAAG TCGGCAATCC AGAAAGTGTG CATTTTGCCG AACCGATGAT GGCGTCACCT
AAGGTGGCGA CATTTTTATC TCAATGGCAG GGAGAGCGTG ATGATTGA
 
Protein sequence
MIQPQKIVVC GTLFGQVYLS AFKTAFEKGA LAGILAQGSE RSRQLAHAYG VPLYHHVDEL 
PDDINMACVV IRSTIVGGKG SEITKALLKR GISVLQEHPV CLEDVAECLR LARQQGCHYQ
VNTHYPHVPA VRQFIAYLHE AMQTQKPCFI EATCGVQVIC GLLDIIGRVL GGHFSPYGFS
VAGGDVLLRS LLENPAPYTQ LQGVIAGVPL TLNLQNQLDP AAPDNHFHIM HRLCVGLPSG
NLLLVNTHGP VIWSPYFHIP RVRTPFGCRE VIDPDDAPHY FLPPLSQLFS QESDNLLSVL
HHQWPSAIRH ALREFIEQQQ HSSPAYAQFL LSLTQVWKTL MEKVGNPESV HFAEPMMASP
KVATFLSQWQ GERDD