Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0750 |
Symbol | |
ID | 6091053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 827238 |
End bp | 829310 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641595811 |
Product | TonB-dependent receptor |
Protein accession | YP_001719504 |
Protein GI | 170022999 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.921398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTAT TTTATCGGAA ATATTTAACT GTAACGTTTT TAATTTCATT ACCCTGCCTA GCGTGGTCAC AAAGTCATAA TAACAGTAAG GATGAATTAG ACACTATTAC GGTAGTTGCA CAAAAAATTA ATCAACAGCA GCAAAAAACA CCCATAAGTA TAAGTGTATT AACGGGCTTT GATTTAGAAA GAGAAAATAT AGAAAATATC TACGAATCAA TAATGCGCAT CCCTAATGTC TATATGGTTA AAGCAGGCAA TCCATCTGAC GCAGGTTTTT TTACCATGCG AGGGACGACT CCCGGAATGG AAGGGATTCA ATCAGTAGGT TTCTTTATTG ATGGTGTTTA TGCTAATACT TTTGATACGG AATTATTAGA TGTTGATAGA ATCGAAGTAT TAAGAGGCCC TCAAGCGACG CTATATGGCC GTAATACGGA ATCTGGAGTA ATCAATGTCA TTACTAAAAA TCCTGAATTT TCACCTGAGT ATAAAATAGG TCTATCTTAT GGGAATTATA ATCGCACGCA GGTAACCACG GTTTTAGGTG GAAGTATTAA TGACAGTGAA CAGTTTTCAT ATCGTGCAGC ATTGAAATAT CTTTATGGAA ATGGCTACTT TAAGCGTGAC TATGACGGTA AAAATAATGT AGATAATCTC AATGATTTTA GTGGTCGGTT TAAACTACGT TGGCAATCTA TGGATGATGG TTGGGATGTG ATGACGACCT TTGATATCCA AAATAGGCGT AACGGAAACA CGTCTTTTAC CGCATTAGAT AAAATAAAGT CGGGTCAAAA ATATGTTGAC TCAAATTATA TTGGCAAATC TGATGTTGAT GCTTATAAAG GTCAAGTAAA TGCAGTTTAT ACCTTTGATG ATATTGATTT TACCTCGGTT AGTGCTTATG TAGACGAAAG AAAAGTTGAT AATCAAGACC TCGATTTTAC GCGATTATCA ATTAGTGAAC TATTGATGAA TCGAAAAACA AAACAATTTT CACAAGAGTT TCGTTTGAAC TCTAAATACA GTGGGCCATT TAATTGGTTG ATAGGGAGCT ATTATTTTTA TCAAGATGAT GAAAATGAAA TTGATTTCCG CTATCTGCCC TATAACTTAG CACAAATTCG GAAATCCGAT ATCAAGACCA ATAACTACGC AGTGTTTGGC AATGTTAATT ATTACCTACT GAATGATGTT GAGCTTGTGG CGGGTGCAAG GTATGACTAT GAGAAAAAGA AACTTAACTT TTTGATGGAT AATGGGTTTA ACCCATATCA GCCGTATTCT CATGATAATA ATAGTAATTC ATTTGGGGCT TTTTTGCCTA AGGTGGGATT GAATTATTAT ATTACTGGCG ACGCCATGCT ATATACCAGC ATAGCACGGG GGTATAAAAG TGGCGGGTTT AACACGTTAG GGCCTCAATC TAGTCGCGCT TATAATGCAG AATATATGAC GACTTATGAG GCCGGTGTTA AAACCGAATG GTTTGATAGA ACGGTTCGTT GGAATACGTC TCTATTCTGG AATGATATGA AAGATCAGCA AGTCGAAGTG GCGTATTATC CTATTTCTTA TTCGGTTAAC AGCGGTAAGT CATTAAGCCG TGGGTTGGAG TCTGAATTTG AGTGGCGCAT TACGCGTGGC CTGACTGCAT TCGCAAATGT AGGCTATACT GATGCATATT TTAAAAACTT CCCAACAGAA ATTAAAGTAG ATAATAACTA TATCCCTGTT AACTATAAAG ATAATCGACC GGCTAACTCA CCAAGGTACA CTTATAGTAT TGGTGCCGAT TATAACTTTC TTAACGGTTA TTTTGTTAAT GCCACTTATA ATGTTAAAGG AAGTACCTAT CTTGATAATG CAAATAGTAA AAAACAGCCA GCTTATGGGC TATTAGATCT TACTGCGGGT TATGAAAATA AAGATTATGG TGTCAATCTT TGGATAAAGA ATATTCTTGA TGAAACTTAT GTGACTCGTG CTTTCAAAAT GGATGATGGG GTATGGTATG GGCGCGCGGG TGAACCTATT AACTTTGGGG TTAATTTCAA TGTTAAATTT TAA
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Protein sequence | MMVFYRKYLT VTFLISLPCL AWSQSHNNSK DELDTITVVA QKINQQQQKT PISISVLTGF DLERENIENI YESIMRIPNV YMVKAGNPSD AGFFTMRGTT PGMEGIQSVG FFIDGVYANT FDTELLDVDR IEVLRGPQAT LYGRNTESGV INVITKNPEF SPEYKIGLSY GNYNRTQVTT VLGGSINDSE QFSYRAALKY LYGNGYFKRD YDGKNNVDNL NDFSGRFKLR WQSMDDGWDV MTTFDIQNRR NGNTSFTALD KIKSGQKYVD SNYIGKSDVD AYKGQVNAVY TFDDIDFTSV SAYVDERKVD NQDLDFTRLS ISELLMNRKT KQFSQEFRLN SKYSGPFNWL IGSYYFYQDD ENEIDFRYLP YNLAQIRKSD IKTNNYAVFG NVNYYLLNDV ELVAGARYDY EKKKLNFLMD NGFNPYQPYS HDNNSNSFGA FLPKVGLNYY ITGDAMLYTS IARGYKSGGF NTLGPQSSRA YNAEYMTTYE AGVKTEWFDR TVRWNTSLFW NDMKDQQVEV AYYPISYSVN SGKSLSRGLE SEFEWRITRG LTAFANVGYT DAYFKNFPTE IKVDNNYIPV NYKDNRPANS PRYTYSIGAD YNFLNGYFVN ATYNVKGSTY LDNANSKKQP AYGLLDLTAG YENKDYGVNL WIKNILDETY VTRAFKMDDG VWYGRAGEPI NFGVNFNVKF
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