| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0737 |
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| Symbol | |
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| ID | 6090479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 793502 |
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| End bp | 796069 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641595798 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001719491 |
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| Protein GI | 170022986 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATG CCAGACCGCC AGAATCAACG TCACGGATAA CAGGGGAAAA TGTTTTTTTT
GCAAAACGGA TACTGCAAAC CATGGCTTTG CTGGTTGGGA TGACGATCAT TATTGCTGCT
GTGGGTATTA TTTATATCGC ATCACAATTA AATGAACAGG CAAGTGTACA AAGCCGCTTC
CTGATCGAAA AAGCGTGGAA AATGCAGCAG GACTCACTCA AAACCAGAAT AAAAGATAAT
GCATTTTGGG GTGATGCTTA CCAGCACCTG CATGTAAAAA TGGATACCGA CTGGGCCTTT
ATTAGCCAAA ATATGGGGCC TTCCCTGTAT AAAGATTTTA GTCTTGAAGG TGTCTTTGTC
ATTGATGGGC AGGGAAAGAC CCGTTATTCA GTGATCAATG GGCAATTAGT CAATACCGAC
CTACAGAGTT GGCTGCATAA AGATATTACG CCACTAATCG ATATCGCACG TCAGCGGGCT
GAAAAACCAT ATATTGCTGT CGATACTCTC GAAATAGCGG GTCAGCCAGC ATTAATTGCC
GCCGCCGCAT TAACCCCCGG AGAGGATCCG CGTGTCCAAT GGGTTGCTGG CCCCCCTTCC
GTGTTGGTAT TTATCAATAT CCTGACACCG GCTGAACTGA GCGCATTGGG GGAGAATTAT
GGTATCCACA ACCTGCGTAT GCCGAGAAAT AGCCAGGATG CCACATCCAA ACCTTCGCTG
GTCATCGCCT CATCAGATAA CAGTACCCTG ACCTTACATT GGGATCAGGA GATGCCAGGA
ACCCCATTAT TAAATATCTT GCTACCGTTA CTGGCGTTGG TTGCCCTGAT CATTGGGTTA
ACCGCCTGGC TGGTTATACG CCGCGCCATC TCGGAGGCGC AAGCCACCGA TAGGAGCCGG
GCCGCGTTGG CTGCCAGCGA AGAACGTTTC CGCCATGTGG CAGAATCGGC CAGTGATTGG
TTATGGGAGA CCGACGCAGA GTTGCAGGTG ACTTATCTCT CACCACGCTT CTTAATCATC
AGCGGATGGA GTGTTGATCA CTGGCTGGGG CTTAATCTTG ATTCACTGTT AAATTGTGAC
ATTACTTCGC TACGGACTTG GTTGCAGCAC ACCCATTTAA CTGATTCACG TAACGAACTG
CAATGCACTT ATTTCTCAGC TAAAGGTAGC AAACGGGTCT GCCGAATCCA TGCCAAGCCG
ATCATTCAGC AGGGTGAAAT CGTCGGTTTT CGTGGTACCG CCTCAGATCT TACGCGTGAA
ATCGAAGCTG AGAAACGTAT TGAGCACCTT TCCCTACATG ATGCGCTAAC CGGTTTACCT
AACCGGACGT TGATGACCGA GTTCTTGGAA AATAAGCTGC ACAATCTGGC CGCCGTAGAG
CATCCCTTGG TGATCCTTAA TGTTAATTTG GATAAGTTCA AGCCCGTCAA TGACATCTTT
GGTCATGTCA CTGGCGATCA AGTGCTTTAT CAGGTTGCTG AGCGCCTGCG CTCCTGCTTG
CGTGACAAGG ATTTAGTCTC CCGCCAAGGC GGAGATGAGT TTGTTTTGAT TATTTCCAAT
CTCTCTTCTT CCTACGAGAT CGAACTGTTA TGCGCCAGGG TGATCACCCG TCTCCAAACA
CCGTACGTGA TCAATGATCA AGAGATTTAT CTTGGGGCCA GTATTGGTAT TACGTTAGCA
CCACAAGACT CAATGCAAGC GGAAGAATTG CTGCGATTCG CCGATATCGC GATGTGTGAA
GCCAAAAATA GTCCTCGTAA CCGGTGGCGT TTTTACGCCA GTGAAATGAA TGACCGCCTG
ATGCAACGAA TTGAACTTGA AAAGTTTTTA CGTTTAGCCG TTAAAAAAAG CGAATTCTGT
CTTTACTATC AACCTCGCTA CCGTACTGAC GACATGCAAC TGATAGGGGC AGAGGCGTTG
GTACGCTGGA ATCACCCGGT TCTGGGGTTG CTGATGCCAG ATCAATTTAT TGCGTTAGCG
GAGGAGACCG GGCTTATCAC TGCCATCAGC GATTGGACCC TCTTACAAGC CTGCCAAGAC
GCGATGACCT GGCCAACCTC ATTGATTGTC TCGGTAAATA TCTCGGCGAT TGAATTCAGG
GGCCAATGTC TTATCGAGCG AGTCCGGCAA GCCCTCTTAG TGACAGGTTT GCCCAGCCAT
CGGCTCGAGT TGGAGATCAC CGAGCGGATC ATGATTGAAG ATGCTGATGG CGCACTGAAG
ATCATGACTG CGCTAAAAAC CTTGGGTATA CGCCTGTCGA TAGATGATTT TGGTACAGGA
TATTCTTCAC TGAATTATCT GCACCGTTTT CCTTTTGACG GGTTGAAAAT TGATAAAAGT
TTTATTGATA AACTCACCGA GTCACATGAA GGGCAATCCA TTGTCGAAGG TATTATTAAC
CTGGGCCATG CTATTTCAAT GACCGTGATC GCCGAAGGCG TGGAAACGGC CGAGCAACTC
ACCTATTTGC AGTCACTCCA TTGTGATGAG GTGCAGGGAT ATTTTCTTGC CAAACCTATG
CCGGTAGAGG CGTTGTCTTT GGTTTTTTCT GAGGATTTAT CGGTGTGA
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| Protein sequence | MTNARPPEST SRITGENVFF AKRILQTMAL LVGMTIIIAA VGIIYIASQL NEQASVQSRF
LIEKAWKMQQ DSLKTRIKDN AFWGDAYQHL HVKMDTDWAF ISQNMGPSLY KDFSLEGVFV
IDGQGKTRYS VINGQLVNTD LQSWLHKDIT PLIDIARQRA EKPYIAVDTL EIAGQPALIA
AAALTPGEDP RVQWVAGPPS VLVFINILTP AELSALGENY GIHNLRMPRN SQDATSKPSL
VIASSDNSTL TLHWDQEMPG TPLLNILLPL LALVALIIGL TAWLVIRRAI SEAQATDRSR
AALAASEERF RHVAESASDW LWETDAELQV TYLSPRFLII SGWSVDHWLG LNLDSLLNCD
ITSLRTWLQH THLTDSRNEL QCTYFSAKGS KRVCRIHAKP IIQQGEIVGF RGTASDLTRE
IEAEKRIEHL SLHDALTGLP NRTLMTEFLE NKLHNLAAVE HPLVILNVNL DKFKPVNDIF
GHVTGDQVLY QVAERLRSCL RDKDLVSRQG GDEFVLIISN LSSSYEIELL CARVITRLQT
PYVINDQEIY LGASIGITLA PQDSMQAEEL LRFADIAMCE AKNSPRNRWR FYASEMNDRL
MQRIELEKFL RLAVKKSEFC LYYQPRYRTD DMQLIGAEAL VRWNHPVLGL LMPDQFIALA
EETGLITAIS DWTLLQACQD AMTWPTSLIV SVNISAIEFR GQCLIERVRQ ALLVTGLPSH
RLELEITERI MIEDADGALK IMTALKTLGI RLSIDDFGTG YSSLNYLHRF PFDGLKIDKS
FIDKLTESHE GQSIVEGIIN LGHAISMTVI AEGVETAEQL TYLQSLHCDE VQGYFLAKPM
PVEALSLVFS EDLSV
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