Gene YPK_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0725 
Symbol 
ID6090587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp783194 
End bp784111 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID641595786 
Productputative transcriptional regulator, CadC 
Protein accessionYP_001719479 
Protein GI170022974 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACTGA TCAACGTATT ACTGGAACAT GCTGGCGAAA TTTTATCCCG TGATGAATTA 
ACAAATTTAG TCTGGAAGCG CCGAGTTATT GGCAATAACA GCTTGCCCAA TGCAATTCAC
ACACTGCGTG TCGCGCTGGG TGATGAAAAT AAACAACAGC GCATCATCCA GACCATCCCC
AAGATAGGTT ATCTGTTGGA TGCCAGCTTT TGTGAAATTA TCGACGCCAC AAAAGAGACA
GAAACGGCGG AACAGACAGC ATTGGCCCAA ACCGATGATG AAGAGATAGT CGCACCATTG
AATGGCGTCA CTCTCCACGA GGCGGTAGCA GCAAGTGCAT CTGATATTGC CCATAGCAGG
ATAGCGGAGA CTAACGAAGA ACCGGCAGAC ACGGCGATCA ACGACCCCTT ACCCCCAACA
CAGACCGGGC CGGTGGTGAT GACTCGTCAG CACGTTACGG CCAGTCAGCG CCCACCGTGG
AATATTTTCA GCTATTGGAG CCGGGTGGCT ATTGCGTTAT TGGTGCTCAT CACTGCGGTC
GCTTTTTACC GTTTATTTCC GCAGAACAAA GGGGTGAGCT ACACCGCTAT TGAGCAAGAT
CAGGAAGCGT ACAGCAATAT CCGCCTGTTT CAGTTGGTGG ACAGTGCGCT GTCGCTACAG
CAGGAAGAGA AACTTAATCA ACGCTTAAAA GACACGCTGT ATGCCATAAA TAAACAGAGT
AAAGCCAAGA GTATGAGCAT TAATATTTAT TATTACGTCT CTCTCAGGCG CTTGGATTTT
ACCTTCTCGG TAGAAAGTCA ATGCGAGAAT AAACAGTTAG GGATGACCAT TTACCATTGG
CGTCAGAACT CTCAGTTATT AAATAATTTG ATTTACCGTG AAATGGAGAG AAAAATAAAT
GAAATGGTTA ACTGCTAG
 
Protein sequence
MKLINVLLEH AGEILSRDEL TNLVWKRRVI GNNSLPNAIH TLRVALGDEN KQQRIIQTIP 
KIGYLLDASF CEIIDATKET ETAEQTALAQ TDDEEIVAPL NGVTLHEAVA ASASDIAHSR
IAETNEEPAD TAINDPLPPT QTGPVVMTRQ HVTASQRPPW NIFSYWSRVA IALLVLITAV
AFYRLFPQNK GVSYTAIEQD QEAYSNIRLF QLVDSALSLQ QEEKLNQRLK DTLYAINKQS
KAKSMSINIY YYVSLRRLDF TFSVESQCEN KQLGMTIYHW RQNSQLLNNL IYREMERKIN
EMVNC