Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0725 |
Symbol | |
ID | 6090587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 783194 |
End bp | 784111 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641595786 |
Product | putative transcriptional regulator, CadC |
Protein accession | YP_001719479 |
Protein GI | 170022974 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTGA TCAACGTATT ACTGGAACAT GCTGGCGAAA TTTTATCCCG TGATGAATTA ACAAATTTAG TCTGGAAGCG CCGAGTTATT GGCAATAACA GCTTGCCCAA TGCAATTCAC ACACTGCGTG TCGCGCTGGG TGATGAAAAT AAACAACAGC GCATCATCCA GACCATCCCC AAGATAGGTT ATCTGTTGGA TGCCAGCTTT TGTGAAATTA TCGACGCCAC AAAAGAGACA GAAACGGCGG AACAGACAGC ATTGGCCCAA ACCGATGATG AAGAGATAGT CGCACCATTG AATGGCGTCA CTCTCCACGA GGCGGTAGCA GCAAGTGCAT CTGATATTGC CCATAGCAGG ATAGCGGAGA CTAACGAAGA ACCGGCAGAC ACGGCGATCA ACGACCCCTT ACCCCCAACA CAGACCGGGC CGGTGGTGAT GACTCGTCAG CACGTTACGG CCAGTCAGCG CCCACCGTGG AATATTTTCA GCTATTGGAG CCGGGTGGCT ATTGCGTTAT TGGTGCTCAT CACTGCGGTC GCTTTTTACC GTTTATTTCC GCAGAACAAA GGGGTGAGCT ACACCGCTAT TGAGCAAGAT CAGGAAGCGT ACAGCAATAT CCGCCTGTTT CAGTTGGTGG ACAGTGCGCT GTCGCTACAG CAGGAAGAGA AACTTAATCA ACGCTTAAAA GACACGCTGT ATGCCATAAA TAAACAGAGT AAAGCCAAGA GTATGAGCAT TAATATTTAT TATTACGTCT CTCTCAGGCG CTTGGATTTT ACCTTCTCGG TAGAAAGTCA ATGCGAGAAT AAACAGTTAG GGATGACCAT TTACCATTGG CGTCAGAACT CTCAGTTATT AAATAATTTG ATTTACCGTG AAATGGAGAG AAAAATAAAT GAAATGGTTA ACTGCTAG
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Protein sequence | MKLINVLLEH AGEILSRDEL TNLVWKRRVI GNNSLPNAIH TLRVALGDEN KQQRIIQTIP KIGYLLDASF CEIIDATKET ETAEQTALAQ TDDEEIVAPL NGVTLHEAVA ASASDIAHSR IAETNEEPAD TAINDPLPPT QTGPVVMTRQ HVTASQRPPW NIFSYWSRVA IALLVLITAV AFYRLFPQNK GVSYTAIEQD QEAYSNIRLF QLVDSALSLQ QEEKLNQRLK DTLYAINKQS KAKSMSINIY YYVSLRRLDF TFSVESQCEN KQLGMTIYHW RQNSQLLNNL IYREMERKIN EMVNC
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