Gene YPK_0721 details

Gene Information

• Locus tag: YPK_0721
• Symbol: flgD
• ID: 6087400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 780802
• End bp: 781458
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641595782
• Product: flagellar basal body rod modification protein
• Protein accession: YP_001719475
• Protein GI: 170022970
• COG category: [N] Cell motility
• COG ID: [COG1843] Flagellar hook capping protein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGATTA ATGAAAGCAG AAATTCAGCC AATGTTGGCA ATCAATCCCC AGCACCTGAA 
GGTGGCCTGC CGGGAGGGGA GCAGTTAAAT AACCAATTTA TGACCTTGTT GGTGGCGCAG 
ATTAAAAATC AAGACCCACT GAACCCGGCA GATGGTACCG AGTTTGTTAG CCAAATGGCG 
CAACTCTCGC AGGTTCAGGC CACGGAGAAC ATGGCAAAGC TGCTCAAGAG CAATACCGTT 
CAGATGGCGA AAATGCAGAC CATGGCAACG GCCAATTTGG TTGGGCAGCA AGTGATGGTT 
GAAGGCCATG AAATTACCTT AGGTAAGGAC CCTGTTGCCG GGCGCTTAAC GCTGAAACAG 
CCTGCCCCGA CGCTGTTACT GCACATCACT GACATCTTGG GCCAAAAAAA GGTTATCGAT 
TTGGGTAAAC AACCGGCGGG TCCGGTGAGT TTCACCCTTG ATCCGGCAGT GGCCAAGCTC 
CAACCCGGCC AATACCAACT GAGTGCCGTC AGTGGCAGTG GGGAAGAACT GATTCCGCTA 
GAAGTGGCAG GCAAAGTGAA CAACGTGCGT ATTTCACCAC AAGGTGGTGC AGCGCAACTG 
AATATTACCG GCCTTGGCGA GGTTTCATAC AGCCAAATCA CACAATTCGG GGCCTAG 

 

Protein sequence

MQINESRNSA NVGNQSPAPE GGLPGGEQLN NQFMTLLVAQ IKNQDPLNPA DGTEFVSQMA 
QLSQVQATEN MAKLLKSNTV QMAKMQTMAT ANLVGQQVMV EGHEITLGKD PVAGRLTLKQ 
PAPTLLLHIT DILGQKKVID LGKQPAGPVS FTLDPAVAKL QPGQYQLSAV SGSGEELIPL 
EVAGKVNNVR ISPQGGAAQL NITGLGEVSY SQITQFGA