Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0713 |
Symbol | fliH |
ID | 6087154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 775253 |
End bp | 775969 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641595774 |
Product | flagellar assembly protein H |
Protein accession | YP_001719467 |
Protein GI | 170022962 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATAA AAAATACCCC ACGGGCGGGG GCAGTGAAAC TGCGGGTTCA TCAGTTTCCA CCGCTACGTA AAGTGCGTCA GGTGGCCCCG TCAGCGGCAG ACCAGACACT GGATCCGGCA GAATACCAAA AGCAACTGAT GGCAGGCTTT CAGGAGGGGA TCAGCCAGGG ATTTGATAAA GGGCTGGCCG AAGGGAAAGA GGAAGGCTAT CAGGAAGGGG TGCGTCTTGG GCATGATGAC GGGCTGAAAA AGGGGCGCAT TGAGGGGCGG CAATCTGAGT TAGCCAGTTT TAATGATGTG ATTAAACCCT TCAGCGGCTA TATCACCCAA CTACATACCT ATTTAGAGAC CTATGAGCAG CGCCGCCGGG ATGAGCTATT ACAACTGGTG GAGAAAGTGA CGCGGCAGGT GATCCGCTGT GAGCTGGCGT TGCAACCCGC GCAGCTTCTA ACCTTAGTGG AAGAGGCGTT GGCGGCGCTG CCCATGGTGC CACAGCAACT TAAGGTCTAT CTGAATCCGG CAGAATTTGG TCGTATTAAT GATGTTGCGC CAGAAAAAGT GCAAGCGTGG GGGTTGGCGG CAGATCCAGA CATGGTGGGC GGTGAGTGCC GTATCGTCAC AGAAACCACG GAAATTGATG TGGGGTGCCA GCACCGTTTG GATCAATGCA TTGGTGCGTT GCACAGCAGT TTTTTGACGG AACCTCACCA TGAGTGA
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Protein sequence | MSIKNTPRAG AVKLRVHQFP PLRKVRQVAP SAADQTLDPA EYQKQLMAGF QEGISQGFDK GLAEGKEEGY QEGVRLGHDD GLKKGRIEGR QSELASFNDV IKPFSGYITQ LHTYLETYEQ RRRDELLQLV EKVTRQVIRC ELALQPAQLL TLVEEALAAL PMVPQQLKVY LNPAEFGRIN DVAPEKVQAW GLAADPDMVG GECRIVTETT EIDVGCQHRL DQCIGALHSS FLTEPHHE
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