Gene YPK_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0713 
SymbolfliH 
ID6087154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp775253 
End bp775969 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content54% 
IMG OID641595774 
Productflagellar assembly protein H 
Protein accessionYP_001719467 
Protein GI170022962 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAA AAAATACCCC ACGGGCGGGG GCAGTGAAAC TGCGGGTTCA TCAGTTTCCA 
CCGCTACGTA AAGTGCGTCA GGTGGCCCCG TCAGCGGCAG ACCAGACACT GGATCCGGCA
GAATACCAAA AGCAACTGAT GGCAGGCTTT CAGGAGGGGA TCAGCCAGGG ATTTGATAAA
GGGCTGGCCG AAGGGAAAGA GGAAGGCTAT CAGGAAGGGG TGCGTCTTGG GCATGATGAC
GGGCTGAAAA AGGGGCGCAT TGAGGGGCGG CAATCTGAGT TAGCCAGTTT TAATGATGTG
ATTAAACCCT TCAGCGGCTA TATCACCCAA CTACATACCT ATTTAGAGAC CTATGAGCAG
CGCCGCCGGG ATGAGCTATT ACAACTGGTG GAGAAAGTGA CGCGGCAGGT GATCCGCTGT
GAGCTGGCGT TGCAACCCGC GCAGCTTCTA ACCTTAGTGG AAGAGGCGTT GGCGGCGCTG
CCCATGGTGC CACAGCAACT TAAGGTCTAT CTGAATCCGG CAGAATTTGG TCGTATTAAT
GATGTTGCGC CAGAAAAAGT GCAAGCGTGG GGGTTGGCGG CAGATCCAGA CATGGTGGGC
GGTGAGTGCC GTATCGTCAC AGAAACCACG GAAATTGATG TGGGGTGCCA GCACCGTTTG
GATCAATGCA TTGGTGCGTT GCACAGCAGT TTTTTGACGG AACCTCACCA TGAGTGA
 
Protein sequence
MSIKNTPRAG AVKLRVHQFP PLRKVRQVAP SAADQTLDPA EYQKQLMAGF QEGISQGFDK 
GLAEGKEEGY QEGVRLGHDD GLKKGRIEGR QSELASFNDV IKPFSGYITQ LHTYLETYEQ
RRRDELLQLV EKVTRQVIRC ELALQPAQLL TLVEEALAAL PMVPQQLKVY LNPAEFGRIN
DVAPEKVQAW GLAADPDMVG GECRIVTETT EIDVGCQHRL DQCIGALHSS FLTEPHHE