| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0710 |
|---|
| Symbol | |
|---|
| ID | 6089505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 772203 |
|---|
| End bp | 772583 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641595771 |
|---|
| Product | flagellar hook-basal body complex protein FliE |
|---|
| Protein accession | YP_001719464 |
|---|
| Protein GI | 170022959 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1677] Flagellar hook-basal body protein |
|---|
| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.113201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACA TTGATTCTAT CAATATGCCT CGCTCGCAAT CACCAGTGAT GCTGGAAATG
CGGCAAATGG CAGCCATGGC AGGCAGCGGT CTTGAGTTTG GCACAATCCA GCCAGCCGCA
ACCAATAGCC CGTTCTTCCC CGTGGAAAAG GGGGCCAATA ATCTCTCTTT TTCTCAGGTG
CTTAACGGCG CGATTAAGAG TGTGGACCAG CTACAACACG TCGCCAGTGA GAAACAGACC
GCGATGGATA TGGGCATCAG TGACGACTTA ACCGGCACGA TGTTAGCGAG CCAGAAAGCC
AGTGTGGCTT TCTCCGCCAT GGTGCAGGTG CGCAATAAGC TCACTTCTGC ATTAGATGAT
GTTATGAATA CTGCGCTGTA G
|
|---|
| Protein sequence | MDNIDSINMP RSQSPVMLEM RQMAAMAGSG LEFGTIQPAA TNSPFFPVEK GANNLSFSQV
LNGAIKSVDQ LQHVASEKQT AMDMGISDDL TGTMLASQKA SVAFSAMVQV RNKLTSALDD
VMNTAL
|
|---|
| |