Gene YPK_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0708 
Symbol 
ID6090250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp769736 
End bp770635 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content38% 
IMG OID641595769 
Productflagellar motor switch protein 
Protein accessionYP_001719462 
Protein GI170022957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0314955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCAA ATAAAGTCAA AGCAAAGGTC TATAACCATG ACCCGCGACC AGACATCGTA 
TCGCTTGAAA TTAACAAGCT TGGCCGCCCT CATCACAAAA TACCTAAAAT AGTCAATAGC
TATTTTTCTA TTATTGAGAG CGAAATCAGT CTCTATTTTT TAAAAAAATA CAGAATAAAT
ATTACGCTTG ATGATATTAA GTTCCAAACA AATTGCAGTC ATAAGAATGC CAAAATGCTA
ACCAGCCAGA TGGGTAATAT CGCATTCGAT ATCGACCGTC TGTTGTTACT TAACATTCTT
AATGACTACT ATGGATTAAG CCAAGAAAAA TATGGATTAA GCCCAGAAAA AAAAACCACG
ACCACGGGAA AGCTATCACC GCTGACCAAA ACAGAAGAAA GGCTAAAAAA CAAACTCGGG
CTTGAAATAA CCGATCTCTT TCTTAATCAG CCATTTTTTG GTGAACACCT AATCATTAAC
AACAGCACCG CTGCGTTAAT CGCGTGCTGG TCATACCGTA TTGATTTTTT TCTAAAAGAT
TATAACAAAA GTGGATTCAG CATTTTTATT GATGCACCAC ATATAGATAG GCTTATCGAT
ACCATAAAGA CCAAAAGTGA AAAAGCAGTA GAAAAAAATG TCTCACTGTC AGAGAGGCAA
CTTGAACACT TAGTCAAAAA ATTACCCGTT ACGCTCACCA GCCAATTAAG CAACATTAAC
CTGACACTGG CTGAGTTAAT GGCCTTAAAA GAGGGCGATA TTATTTCAGC TTCATTGCCC
GAATATTTCC CCGTATTTAT TGGCAAAGAA GCGCTATTCA GTGCCGCCAT TACCGAGAAC
CGCGGCAAGT TATTCTTTTC TGAATTTAAT GACCAACCCA ACGAGATGAA CCATGACTGA
 
Protein sequence
MQSNKVKAKV YNHDPRPDIV SLEINKLGRP HHKIPKIVNS YFSIIESEIS LYFLKKYRIN 
ITLDDIKFQT NCSHKNAKML TSQMGNIAFD IDRLLLLNIL NDYYGLSQEK YGLSPEKKTT
TTGKLSPLTK TEERLKNKLG LEITDLFLNQ PFFGEHLIIN NSTAALIACW SYRIDFFLKD
YNKSGFSIFI DAPHIDRLID TIKTKSEKAV EKNVSLSERQ LEHLVKKLPV TLTSQLSNIN
LTLAELMALK EGDIISASLP EYFPVFIGKE ALFSAAITEN RGKLFFSEFN DQPNEMNHD