Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0708 |
Symbol | |
ID | 6090250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 769736 |
End bp | 770635 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641595769 |
Product | flagellar motor switch protein |
Protein accession | YP_001719462 |
Protein GI | 170022957 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0314955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAATCAA ATAAAGTCAA AGCAAAGGTC TATAACCATG ACCCGCGACC AGACATCGTA TCGCTTGAAA TTAACAAGCT TGGCCGCCCT CATCACAAAA TACCTAAAAT AGTCAATAGC TATTTTTCTA TTATTGAGAG CGAAATCAGT CTCTATTTTT TAAAAAAATA CAGAATAAAT ATTACGCTTG ATGATATTAA GTTCCAAACA AATTGCAGTC ATAAGAATGC CAAAATGCTA ACCAGCCAGA TGGGTAATAT CGCATTCGAT ATCGACCGTC TGTTGTTACT TAACATTCTT AATGACTACT ATGGATTAAG CCAAGAAAAA TATGGATTAA GCCCAGAAAA AAAAACCACG ACCACGGGAA AGCTATCACC GCTGACCAAA ACAGAAGAAA GGCTAAAAAA CAAACTCGGG CTTGAAATAA CCGATCTCTT TCTTAATCAG CCATTTTTTG GTGAACACCT AATCATTAAC AACAGCACCG CTGCGTTAAT CGCGTGCTGG TCATACCGTA TTGATTTTTT TCTAAAAGAT TATAACAAAA GTGGATTCAG CATTTTTATT GATGCACCAC ATATAGATAG GCTTATCGAT ACCATAAAGA CCAAAAGTGA AAAAGCAGTA GAAAAAAATG TCTCACTGTC AGAGAGGCAA CTTGAACACT TAGTCAAAAA ATTACCCGTT ACGCTCACCA GCCAATTAAG CAACATTAAC CTGACACTGG CTGAGTTAAT GGCCTTAAAA GAGGGCGATA TTATTTCAGC TTCATTGCCC GAATATTTCC CCGTATTTAT TGGCAAAGAA GCGCTATTCA GTGCCGCCAT TACCGAGAAC CGCGGCAAGT TATTCTTTTC TGAATTTAAT GACCAACCCA ACGAGATGAA CCATGACTGA
|
Protein sequence | MQSNKVKAKV YNHDPRPDIV SLEINKLGRP HHKIPKIVNS YFSIIESEIS LYFLKKYRIN ITLDDIKFQT NCSHKNAKML TSQMGNIAFD IDRLLLLNIL NDYYGLSQEK YGLSPEKKTT TTGKLSPLTK TEERLKNKLG LEITDLFLNQ PFFGEHLIIN NSTAALIACW SYRIDFFLKD YNKSGFSIFI DAPHIDRLID TIKTKSEKAV EKNVSLSERQ LEHLVKKLPV TLTSQLSNIN LTLAELMALK EGDIISASLP EYFPVFIGKE ALFSAAITEN RGKLFFSEFN DQPNEMNHD
|
| |